Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 AL160286.2-201ENST00000567150 934 ntBASIC20.61■□□□□ 0.89
CDH9Q9ULB4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH9Q9ULB4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH9Q9ULB4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.59■□□□□ 0.89
CDH9Q9ULB4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 AC079598.2-202ENST00000546624 1451 ntBASIC20.59■□□□□ 0.89
CDH9Q9ULB4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 RCC2P6-201ENST00000526625 1557 ntBASIC20.59■□□□□ 0.89
CDH9Q9ULB4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH9Q9ULB4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 AC004951.3-201ENST00000418645 1148 ntBASIC20.58■□□□□ 0.89
CDH9Q9ULB4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 Z85996.1-201ENST00000494644 937 ntBASIC20.58■□□□□ 0.89
CDH9Q9ULB4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH9Q9ULB4 DGCR10-201ENST00000609839 495 ntBASIC20.58■□□□□ 0.89
CDH9Q9ULB4 AC130371.2-201ENST00000619443 611 ntBASIC20.58■□□□□ 0.89
CDH9Q9ULB4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.58■□□□□ 0.88
CDH9Q9ULB4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH9Q9ULB4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CDH9Q9ULB4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CDH9Q9ULB4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH9Q9ULB4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH9Q9ULB4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CDH9Q9ULB4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 MMP23A-201ENST00000234610 1017 ntBASIC20.57■□□□□ 0.88
CDH9Q9ULB4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH9Q9ULB4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms