Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 KSR1P1-201ENST00000446298 240 ntBASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 AC097493.4-201ENST00000641197 219 ntBASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP6V0A4Q9HBG4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.64■■□□□ 1.06
ATP6V0A4Q9HBG4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP6V0A4Q9HBG4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 CR392000.1-201ENST00000624770 1228 ntBASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 KRT16P1-201ENST00000399124 1418 ntBASIC21.63■■□□□ 1.05
ATP6V0A4Q9HBG4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 MMP23A-201ENST00000234610 1017 ntBASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 AC012306.2-201ENST00000609350 630 ntBASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 AC010331.1-201ENST00000611423 582 ntBASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 AL445675.2-201ENST00000620291 557 ntBASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms