Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 AL031598.1-201ENST00000561511 1773 ntBASIC18.53■□□□□ 0.56
VCX3BQ9H321 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 RARRES2P11-201ENST00000635158 484 ntBASIC18.52■□□□□ 0.56
VCX3BQ9H321 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.52■□□□□ 0.56
VCX3BQ9H321 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCX3BQ9H321 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.52■□□□□ 0.55
VCX3BQ9H321 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
VCX3BQ9H321 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VCX3BQ9H321 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
VCX3BQ9H321 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.52■□□□□ 0.55
VCX3BQ9H321 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.52■□□□□ 0.55
VCX3BQ9H321 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 EEF1DP3-203ENST00000566025 782 ntBASIC18.51■□□□□ 0.55
VCX3BQ9H321 MIR6724-1-201ENST00000616420 92 ntBASIC18.51■□□□□ 0.55
VCX3BQ9H321 MIR6724-2-201ENST00000616483 92 ntBASIC18.51■□□□□ 0.55
VCX3BQ9H321 MIR6724-4-201ENST00000617390 92 ntBASIC18.51■□□□□ 0.55
VCX3BQ9H321 MIR6724-3-201ENST00000622482 92 ntBASIC18.51■□□□□ 0.55
VCX3BQ9H321 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VCX3BQ9H321 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 AC093525.10-201ENST00000625130 1569 ntBASIC18.51■□□□□ 0.55
VCX3BQ9H321 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.51■□□□□ 0.55
VCX3BQ9H321 AC005224.4-201ENST00000583262 1652 ntBASIC18.5■□□□□ 0.55
VCX3BQ9H321 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VCX3BQ9H321 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VCX3BQ9H321 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VCX3BQ9H321 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VCX3BQ9H321 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.5■□□□□ 0.55
VCX3BQ9H321 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VCX3BQ9H321 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
VCX3BQ9H321 POU5F1P4-201ENST00000413175 1085 ntBASIC18.5■□□□□ 0.55
VCX3BQ9H321 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.5■□□□□ 0.55
VCX3BQ9H321 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.5■□□□□ 0.55
VCX3BQ9H321 AC008175.2-201ENST00000612840 297 ntBASIC18.5■□□□□ 0.55
VCX3BQ9H321 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VCX3BQ9H321 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VCX3BQ9H321 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
VCX3BQ9H321 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VCX3BQ9H321 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX3BQ9H321 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.49■□□□□ 0.55
VCX3BQ9H321 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms