Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 AC116562.2-201ENST00000507042 360 ntBASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 REXO1L10P-201ENST00000615707 1290 ntBASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 REXO1L12P-201ENST00000622156 912 ntBASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCD1Q96GM5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 AL160286.2-201ENST00000567150 934 ntBASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 FSCN1P1-201ENST00000568912 1481 ntBASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCD1Q96GM5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 MIR6786-201ENST00000616843 113 ntBASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCD1Q96GM5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 RBM17P1-201ENST00000453646 1190 ntBASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 B3GAT3P1-201ENST00000471720 806 ntBASIC20.47■□□□□ 0.87
SMARCD1Q96GM5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms