Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHFRQ96EP1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHFRQ96EP1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.83■□□□□ 0.77
CHFRQ96EP1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.83■□□□□ 0.77
CHFRQ96EP1 KRT8P41-201ENST00000533985 1514 ntBASIC19.83■□□□□ 0.77
CHFRQ96EP1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 AC020907.5-201ENST00000624372 1936 ntBASIC19.83■□□□□ 0.77
CHFRQ96EP1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.83■□□□□ 0.77
CHFRQ96EP1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.83■□□□□ 0.77
CHFRQ96EP1 AL160286.2-201ENST00000567150 934 ntBASIC19.83■□□□□ 0.77
CHFRQ96EP1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHFRQ96EP1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CHFRQ96EP1 AC073314.1-201ENST00000568729 2216 ntBASIC19.83■□□□□ 0.76
CHFRQ96EP1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHFRQ96EP1 AP001271.2-201ENST00000624018 1556 ntBASIC19.83■□□□□ 0.76
CHFRQ96EP1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHFRQ96EP1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHFRQ96EP1 RNF152P1-201ENST00000397754 604 ntBASIC19.82■□□□□ 0.76
CHFRQ96EP1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHFRQ96EP1 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.82■□□□□ 0.76
CHFRQ96EP1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHFRQ96EP1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHFRQ96EP1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHFRQ96EP1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHFRQ96EP1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHFRQ96EP1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 AL353719.1-201ENST00000566847 864 ntBASIC19.81■□□□□ 0.76
CHFRQ96EP1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 AC141257.4-201ENST00000634557 245 ntBASIC19.81■□□□□ 0.76
CHFRQ96EP1 AC136944.6-201ENST00000634818 245 ntBASIC19.81■□□□□ 0.76
CHFRQ96EP1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHFRQ96EP1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHFRQ96EP1 AL137060.1-201ENST00000618151 2648 ntBASIC19.81■□□□□ 0.76
CHFRQ96EP1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.81■□□□□ 0.76
CHFRQ96EP1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHFRQ96EP1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHFRQ96EP1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHFRQ96EP1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 TSPY5P-201ENST00000426936 936 ntBASIC19.8■□□□□ 0.76
CHFRQ96EP1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 AC011558.1-201ENST00000623459 338 ntBASIC19.8■□□□□ 0.76
CHFRQ96EP1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHFRQ96EP1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.8■□□□□ 0.76
CHFRQ96EP1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHFRQ96EP1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHFRQ96EP1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHFRQ96EP1 AL691432.2-201ENST00000607222 2038 ntBASIC19.8■□□□□ 0.76
CHFRQ96EP1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.79■□□□□ 0.76
CHFRQ96EP1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.79■□□□□ 0.76
CHFRQ96EP1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHFRQ96EP1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHFRQ96EP1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHFRQ96EP1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.79■□□□□ 0.76
CHFRQ96EP1 COX11P1-201ENST00000489116 835 ntBASIC19.79■□□□□ 0.76
CHFRQ96EP1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.79■□□□□ 0.76
CHFRQ96EP1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.79■□□□□ 0.76
CHFRQ96EP1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.79■□□□□ 0.76
CHFRQ96EP1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.79■□□□□ 0.76
CHFRQ96EP1 AL512408.1-201ENST00000569378 2000 ntBASIC19.79■□□□□ 0.76
CHFRQ96EP1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.79■□□□□ 0.76
CHFRQ96EP1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHFRQ96EP1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms