Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN23Q96B33 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN23Q96B33 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLDN23Q96B33 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN23Q96B33 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN23Q96B33 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN23Q96B33 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN23Q96B33 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN23Q96B33 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN23Q96B33 SPDYE15P-201ENST00000424157 909 ntBASIC19.49■□□□□ 0.71
CLDN23Q96B33 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 MIR3652-201ENST00000579335 131 ntBASIC19.49■□□□□ 0.71
CLDN23Q96B33 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN23Q96B33 AC092119.3-201ENST00000612618 583 ntBASIC19.49■□□□□ 0.71
CLDN23Q96B33 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN23Q96B33 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN23Q96B33 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN23Q96B33 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 LINC01465-201ENST00000408887 1940 ntBASIC19.48■□□□□ 0.71
CLDN23Q96B33 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN23Q96B33 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
CLDN23Q96B33 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 HBZP1-201ENST00000354915 429 ntBASIC19.47■□□□□ 0.71
CLDN23Q96B33 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN23Q96B33 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN23Q96B33 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN23Q96B33 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN23Q96B33 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.46■□□□□ 0.71
CLDN23Q96B33 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN23Q96B33 AC092329.2-201ENST00000598402 547 ntBASIC19.46■□□□□ 0.71
CLDN23Q96B33 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms