Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 AKR1C7P-201ENST00000305623 895 ntBASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 AC016734.2-201ENST00000624325 1377 ntBASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 AC120114.3-201ENST00000611923 658 ntBASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.16□□□□□ -0.3
ALMS1Q8TCU4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 TOB2P1-201ENST00000469761 992 ntBASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 AC092329.2-201ENST00000598402 547 ntBASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALMS1Q8TCU4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ALMS1Q8TCU4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ALMS1Q8TCU4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 KRT18P13-201ENST00000400056 1290 ntBASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 AL160286.2-201ENST00000567150 934 ntBASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 LINC00265-3P-201ENST00000447588 903 ntBASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.14□□□□□ -0.31
ALMS1Q8TCU4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 AC011498.5-201ENST00000592027 486 ntBASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms