Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC004951.3-201ENST00000418645 1148 ntBASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 AL160286.2-201ENST00000567150 934 ntBASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCDC60Q8IWA6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 AC091390.4-202ENST00000476426 537 ntBASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 AC145285.6-201ENST00000604632 637 ntBASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 AC010947.1-201ENST00000623454 693 ntBASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 PCDHAC2-203ENST00000615316 3011 ntBASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC60Q8IWA6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 AP005242.2-201ENST00000580065 1175 ntBASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 AP000692.2-201ENST00000608391 879 ntBASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC60Q8IWA6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 AC097488.1-201ENST00000507834 756 ntBASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC60Q8IWA6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC60Q8IWA6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC60Q8IWA6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC60Q8IWA6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC60Q8IWA6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC60Q8IWA6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC60Q8IWA6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC60Q8IWA6 NAPSB-206ENST00000562112 1266 ntBASIC21.64■■□□□ 1.05
CCDC60Q8IWA6 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.64■■□□□ 1.05
CCDC60Q8IWA6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC60Q8IWA6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC60Q8IWA6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC60Q8IWA6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC60Q8IWA6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC60Q8IWA6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms