Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 CROCCP3-202ENST00000420820 1947 ntBASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDHR3Q6ZTQ4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 FAM201B-201ENST00000458407 597 ntBASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDHR3Q6ZTQ4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDHR3Q6ZTQ4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.52■□□□□ 0.71
CDHR3Q6ZTQ4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 AL138781.2-201ENST00000617896 1843 ntBASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 POU5F1P3-201ENST00000428824 1078 ntBASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR3Q6ZTQ4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 AL049812.1-201ENST00000432563 2267 ntBASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 TMEM191A-211ENST00000637163 1067 ntBASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 HLA-B-256ENST00000639848 1089 ntBASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.5■□□□□ 0.71
CDHR3Q6ZTQ4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 C2orf69P4-201ENST00000565394 541 ntBASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.49■□□□□ 0.71
CDHR3Q6ZTQ4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms