Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 RPS2P4-201ENST00000476944 856 ntBASIC18.23■□□□□ 0.51
RTL4Q6ZR62 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
RTL4Q6ZR62 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.21■□□□□ 0.51
RTL4Q6ZR62 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.21■□□□□ 0.51
RTL4Q6ZR62 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RTL4Q6ZR62 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 NBPF21P-201ENST00000425093 1451 ntBASIC18.2■□□□□ 0.5
RTL4Q6ZR62 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.2■□□□□ 0.5
RTL4Q6ZR62 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms