Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 KRT8P17-201ENST00000453110 1448 ntBASIC12.34□□□□□ -0.43
LINC00575Q6W349 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 AC141586.3-201ENST00000562166 1838 ntBASIC12.34□□□□□ -0.43
LINC00575Q6W349 AC093525.10-201ENST00000625130 1569 ntBASIC12.34□□□□□ -0.43
LINC00575Q6W349 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 AC068880.1-201ENST00000507289 2297 ntBASIC12.34□□□□□ -0.43
LINC00575Q6W349 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00575Q6W349 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 KRT87P-202ENST00000534226 1464 ntBASIC12.34□□□□□ -0.43
LINC00575Q6W349 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00575Q6W349 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.33□□□□□ -0.44
LINC00575Q6W349 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 AC091799.1-201ENST00000422823 811 ntBASIC12.33□□□□□ -0.44
LINC00575Q6W349 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.33□□□□□ -0.44
LINC00575Q6W349 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 TSPY26P-201ENST00000476365 1326 ntBASIC12.33□□□□□ -0.44
LINC00575Q6W349 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00575Q6W349 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00575Q6W349 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 RARRES2P1-201ENST00000474487 481 ntBASIC12.32□□□□□ -0.44
LINC00575Q6W349 MIR4466-201ENST00000606121 54 ntBASIC12.32□□□□□ -0.44
LINC00575Q6W349 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.32□□□□□ -0.44
LINC00575Q6W349 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms