Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 DRAXINP1-201ENST00000437611 948 ntBASIC16.95■□□□□ 0.3
LRRK2Q5S007 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 REXO1L6P-202ENST00000619970 1078 ntBASIC16.95■□□□□ 0.3
LRRK2Q5S007 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRRK2Q5S007 RASA4DP-201ENST00000460726 1199 ntBASIC16.94■□□□□ 0.3
LRRK2Q5S007 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRK2Q5S007 TPSP2-201ENST00000561760 610 ntBASIC16.94■□□□□ 0.3
LRRK2Q5S007 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRRK2Q5S007 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
LRRK2Q5S007 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRK2Q5S007 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.94■□□□□ 0.3
LRRK2Q5S007 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRK2Q5S007 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRK2Q5S007 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRK2Q5S007 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRK2Q5S007 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRK2Q5S007 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRK2Q5S007 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRK2Q5S007 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRK2Q5S007 PMS2P2-201ENST00000425039 1128 ntBASIC16.93■□□□□ 0.3
LRRK2Q5S007 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
LRRK2Q5S007 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRK2Q5S007 AP001160.2-201ENST00000596071 487 ntBASIC16.93■□□□□ 0.3
LRRK2Q5S007 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRRK2Q5S007 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRK2Q5S007 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRRK2Q5S007 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRK2Q5S007 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRK2Q5S007 TSPY22P-201ENST00000427496 604 ntBASIC16.93■□□□□ 0.3
LRRK2Q5S007 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRK2Q5S007 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRK2Q5S007 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRK2Q5S007 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRK2Q5S007 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRK2Q5S007 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRK2Q5S007 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 MIR564-202ENST00000385049 94 ntBASIC16.92■□□□□ 0.3
LRRK2Q5S007 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRK2Q5S007 AC005104.2-201ENST00000427818 678 ntBASIC16.92■□□□□ 0.3
LRRK2Q5S007 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 LINC00167-201ENST00000530583 1419 ntBASIC16.92■□□□□ 0.3
LRRK2Q5S007 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRK2Q5S007 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRK2Q5S007 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRK2Q5S007 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 LINC01711-201ENST00000598340 967 ntBASIC16.92■□□□□ 0.3
LRRK2Q5S007 AL121772.3-201ENST00000610840 674 ntBASIC16.92■□□□□ 0.3
LRRK2Q5S007 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRK2Q5S007 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 LINC01465-201ENST00000408887 1940 ntBASIC16.91■□□□□ 0.3
LRRK2Q5S007 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 AP002414.4-201ENST00000589764 1148 ntBASIC16.91■□□□□ 0.3
LRRK2Q5S007 TERC-201ENST00000602385 541 ntBASIC16.91■□□□□ 0.3
LRRK2Q5S007 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms