Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTC1Q2NKJ3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTC1Q2NKJ3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
CTC1Q2NKJ3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.83■□□□□ 0.92
CTC1Q2NKJ3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 FAM86EP-206ENST00000510506 987 ntBASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 AP006587.1-201ENST00000534129 1502 ntBASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTC1Q2NKJ3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 AC026396.1-201ENST00000419388 421 ntBASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 AC131212.4-201ENST00000623606 975 ntBASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 AL121956.5-201ENST00000625261 221 ntBASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CTC1Q2NKJ3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 PCED1CP-201ENST00000419887 785 ntBASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 FAM207BP-201ENST00000447172 505 ntBASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 AC116562.4-202ENST00000641738 218 ntBASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTC1Q2NKJ3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 AP005212.1-201ENST00000581547 1997 ntBASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 COX11P1-201ENST00000489116 835 ntBASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 SLC25A1P4-201ENST00000567977 778 ntBASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 AL049796.1-201ENST00000565336 1766 ntBASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTC1Q2NKJ3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 AL450487.1-201ENST00000426799 995 ntBASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
CTC1Q2NKJ3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms