Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 RNA5SP413-201ENST00000516373 109 ntBASIC17.01■□□□□ 0.31
HIST1H3AP68431 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 ANKRD18DP-204ENST00000455355 1975 ntBASIC17■□□□□ 0.31
HIST1H3AP68431 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIST1H3AP68431 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HIST1H3AP68431 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17■□□□□ 0.31
HIST1H3AP68431 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17■□□□□ 0.31
HIST1H3AP68431 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIST1H3AP68431 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HIST1H3AP68431 TUBB8P6-201ENST00000436895 1288 ntBASIC17■□□□□ 0.31
HIST1H3AP68431 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17■□□□□ 0.31
HIST1H3AP68431 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17■□□□□ 0.31
HIST1H3AP68431 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
HIST1H3AP68431 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17■□□□□ 0.31
HIST1H3AP68431 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17■□□□□ 0.31
HIST1H3AP68431 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HIST1H3AP68431 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HIST1H3AP68431 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HIST1H3AP68431 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17■□□□□ 0.31
HIST1H3AP68431 Six3os1_6.1-201ENST00000620790 196 ntBASIC17■□□□□ 0.31
HIST1H3AP68431 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17■□□□□ 0.31
HIST1H3AP68431 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HIST1H3AP68431 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIST1H3AP68431 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 AC104417.2-201ENST00000562989 1793 ntBASIC16.99■□□□□ 0.31
HIST1H3AP68431 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HIST1H3AP68431 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST1H3AP68431 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H3AP68431 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST1H3AP68431 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST1H3AP68431 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms