Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH11P55287 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH11P55287 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDH11P55287 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH11P55287 POU5F1P3-201ENST00000428824 1078 ntBASIC17.8■□□□□ 0.44
CDH11P55287 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH11P55287 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.8■□□□□ 0.44
CDH11P55287 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH11P55287 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH11P55287 CYP2T3P-201ENST00000601990 817 ntBASIC17.8■□□□□ 0.44
CDH11P55287 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH11P55287 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDH11P55287 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH11P55287 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH11P55287 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH11P55287 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH11P55287 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH11P55287 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CDH11P55287 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDH11P55287 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH11P55287 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDH11P55287 KRT17P1-201ENST00000399211 1546 ntBASIC17.79■□□□□ 0.44
CDH11P55287 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDH11P55287 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDH11P55287 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH11P55287 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH11P55287 MCRIP2P1-201ENST00000394346 511 ntBASIC17.79■□□□□ 0.44
CDH11P55287 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH11P55287 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH11P55287 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH11P55287 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.79■□□□□ 0.44
CDH11P55287 AL589743.5-201ENST00000616611 1050 ntBASIC17.79■□□□□ 0.44
CDH11P55287 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH11P55287 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH11P55287 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CDH11P55287 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH11P55287 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDH11P55287 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH11P55287 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CDH11P55287 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH11P55287 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH11P55287 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CDH11P55287 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CDH11P55287 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CDH11P55287 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH11P55287 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDH11P55287 AP001271.2-201ENST00000624018 1556 ntBASIC17.78■□□□□ 0.44
CDH11P55287 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH11P55287 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 HCG11-201ENST00000411553 5696 ntBASIC17.77■□□□□ 0.44
CDH11P55287 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH11P55287 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH11P55287 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH11P55287 LINC01465-201ENST00000408887 1940 ntBASIC17.77■□□□□ 0.44
CDH11P55287 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH11P55287 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms