Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.62■■□□□ 1.05
CPT1AP50416 PKD1P6-201ENST00000343738 4769 ntBASIC21.62■■□□□ 1.05
CPT1AP50416 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPT1AP50416 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPT1AP50416 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.62■■□□□ 1.05
CPT1AP50416 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPT1AP50416 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPT1AP50416 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.61■■□□□ 1.05
CPT1AP50416 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.61■■□□□ 1.05
CPT1AP50416 KRT8P41-201ENST00000533985 1514 ntBASIC21.61■■□□□ 1.05
CPT1AP50416 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPT1AP50416 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPT1AP50416 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.61■■□□□ 1.05
CPT1AP50416 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.61■■□□□ 1.05
CPT1AP50416 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.61■■□□□ 1.05
CPT1AP50416 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPT1AP50416 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPT1AP50416 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPT1AP50416 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.61■■□□□ 1.05
CPT1AP50416 AC011558.1-201ENST00000623459 338 ntBASIC21.61■■□□□ 1.05
CPT1AP50416 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.61■■□□□ 1.05
CPT1AP50416 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CPT1AP50416 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPT1AP50416 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.6■■□□□ 1.05
CPT1AP50416 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.6■■□□□ 1.05
CPT1AP50416 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.6■■□□□ 1.05
CPT1AP50416 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CPT1AP50416 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.6■■□□□ 1.05
CPT1AP50416 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.6■■□□□ 1.05
CPT1AP50416 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.6■■□□□ 1.05
CPT1AP50416 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
CPT1AP50416 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.6■■□□□ 1.05
CPT1AP50416 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPT1AP50416 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CPT1AP50416 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
CPT1AP50416 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CPT1AP50416 HOMER2P1-201ENST00000455653 964 ntBASIC21.59■■□□□ 1.05
CPT1AP50416 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.59■■□□□ 1.05
CPT1AP50416 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.59■■□□□ 1.05
CPT1AP50416 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.59■■□□□ 1.05
CPT1AP50416 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.59■■□□□ 1.05
CPT1AP50416 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.59■■□□□ 1.05
CPT1AP50416 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.59■■□□□ 1.05
CPT1AP50416 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.59■■□□□ 1.05
CPT1AP50416 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CPT1AP50416 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPT1AP50416 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.58■■□□□ 1.05
CPT1AP50416 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.58■■□□□ 1.05
CPT1AP50416 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.58■■□□□ 1.05
CPT1AP50416 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.58■■□□□ 1.05
CPT1AP50416 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.58■■□□□ 1.05
CPT1AP50416 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.58■■□□□ 1.05
CPT1AP50416 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPT1AP50416 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.58■■□□□ 1.05
CPT1AP50416 AP003041.3-201ENST00000527151 707 ntBASIC21.58■■□□□ 1.05
CPT1AP50416 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.58■■□□□ 1.05
CPT1AP50416 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.58■■□□□ 1.05
CPT1AP50416 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPT1AP50416 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.58■■□□□ 1.04
CPT1AP50416 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPT1AP50416 AC009237.14-201ENST00000609975 1594 ntBASIC21.57■■□□□ 1.04
CPT1AP50416 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPT1AP50416 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPT1AP50416 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPT1AP50416 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.57■■□□□ 1.04
CPT1AP50416 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPT1AP50416 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPT1AP50416 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.57■■□□□ 1.04
CPT1AP50416 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPT1AP50416 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.57■■□□□ 1.04
CPT1AP50416 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.57■■□□□ 1.04
CPT1AP50416 AC140113.3-201ENST00000605663 199 ntBASIC21.57■■□□□ 1.04
CPT1AP50416 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.57■■□□□ 1.04
CPT1AP50416 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.57■■□□□ 1.04
CPT1AP50416 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
CPT1AP50416 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CPT1AP50416 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.57■■□□□ 1.04
CPT1AP50416 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPT1AP50416 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms