Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.65■□□□□ 0.9
LHX1P48742 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LHX1P48742 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.65■□□□□ 0.9
LHX1P48742 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.65■□□□□ 0.9
LHX1P48742 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.65■□□□□ 0.9
LHX1P48742 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LHX1P48742 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LHX1P48742 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.65■□□□□ 0.9
LHX1P48742 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.65■□□□□ 0.9
LHX1P48742 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LHX1P48742 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LHX1P48742 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LHX1P48742 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LHX1P48742 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LHX1P48742 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LHX1P48742 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
LHX1P48742 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LHX1P48742 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LHX1P48742 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.64■□□□□ 0.89
LHX1P48742 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.64■□□□□ 0.89
LHX1P48742 AC011506.1-201ENST00000474329 610 ntBASIC20.64■□□□□ 0.89
LHX1P48742 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.64■□□□□ 0.89
LHX1P48742 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.64■□□□□ 0.89
LHX1P48742 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.64■□□□□ 0.89
LHX1P48742 AC130371.2-201ENST00000619443 611 ntBASIC20.64■□□□□ 0.89
LHX1P48742 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.64■□□□□ 0.89
LHX1P48742 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LHX1P48742 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
LHX1P48742 RCC2P6-201ENST00000526625 1557 ntBASIC20.63■□□□□ 0.89
LHX1P48742 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LHX1P48742 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.63■□□□□ 0.89
LHX1P48742 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 AC004951.3-201ENST00000418645 1148 ntBASIC20.63■□□□□ 0.89
LHX1P48742 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.63■□□□□ 0.89
LHX1P48742 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.63■□□□□ 0.89
LHX1P48742 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.63■□□□□ 0.89
LHX1P48742 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.63■□□□□ 0.89
LHX1P48742 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.63■□□□□ 0.89
LHX1P48742 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.63■□□□□ 0.89
LHX1P48742 DGCR10-201ENST00000609839 495 ntBASIC20.63■□□□□ 0.89
LHX1P48742 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LHX1P48742 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX1P48742 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.63■□□□□ 0.89
LHX1P48742 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.63■□□□□ 0.89
LHX1P48742 AC079598.2-202ENST00000546624 1451 ntBASIC20.62■□□□□ 0.89
LHX1P48742 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.62■□□□□ 0.89
LHX1P48742 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LHX1P48742 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LHX1P48742 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.62■□□□□ 0.89
LHX1P48742 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 MMP23A-201ENST00000234610 1017 ntBASIC20.62■□□□□ 0.89
LHX1P48742 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LHX1P48742 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LHX1P48742 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LHX1P48742 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 Z85996.1-201ENST00000494644 937 ntBASIC20.62■□□□□ 0.89
LHX1P48742 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.62■□□□□ 0.89
LHX1P48742 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.62■□□□□ 0.89
LHX1P48742 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.62■□□□□ 0.89
LHX1P48742 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.62■□□□□ 0.89
LHX1P48742 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX1P48742 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms