Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 AL390955.1-201ENST00000428694 934 ntBASIC18.49■□□□□ 0.55
GABRA4P48169 AL160286.2-201ENST00000567150 934 ntBASIC18.49■□□□□ 0.55
GABRA4P48169 DGCR10-201ENST00000609839 495 ntBASIC18.49■□□□□ 0.55
GABRA4P48169 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.49■□□□□ 0.55
GABRA4P48169 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.49■□□□□ 0.55
GABRA4P48169 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.49■□□□□ 0.55
GABRA4P48169 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
GABRA4P48169 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 LINC01465-201ENST00000408887 1940 ntBASIC18.49■□□□□ 0.55
GABRA4P48169 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GABRA4P48169 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GABRA4P48169 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GABRA4P48169 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.48■□□□□ 0.55
GABRA4P48169 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.48■□□□□ 0.55
GABRA4P48169 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.48■□□□□ 0.55
GABRA4P48169 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
GABRA4P48169 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.48■□□□□ 0.55
GABRA4P48169 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 MIR1238-201ENST00000408483 83 ntBASIC18.48■□□□□ 0.55
GABRA4P48169 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.48■□□□□ 0.55
GABRA4P48169 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.48■□□□□ 0.55
GABRA4P48169 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.48■□□□□ 0.55
GABRA4P48169 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.48■□□□□ 0.55
GABRA4P48169 AC133561.5-201ENST00000635547 218 ntBASIC18.48■□□□□ 0.55
GABRA4P48169 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
GABRA4P48169 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
GABRA4P48169 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GABRA4P48169 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.47■□□□□ 0.55
GABRA4P48169 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GABRA4P48169 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GABRA4P48169 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GABRA4P48169 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 AC004951.3-201ENST00000418645 1148 ntBASIC18.47■□□□□ 0.55
GABRA4P48169 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 AC091390.4-202ENST00000476426 537 ntBASIC18.47■□□□□ 0.55
GABRA4P48169 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.47■□□□□ 0.55
GABRA4P48169 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.47■□□□□ 0.55
GABRA4P48169 LINC01023-201ENST00000606054 436 ntBASIC18.47■□□□□ 0.55
GABRA4P48169 AP000692.2-201ENST00000608391 879 ntBASIC18.47■□□□□ 0.55
GABRA4P48169 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.47■□□□□ 0.55
GABRA4P48169 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.47■□□□□ 0.55
GABRA4P48169 AC011298.2-201ENST00000617989 482 ntBASIC18.47■□□□□ 0.55
GABRA4P48169 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GABRA4P48169 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
GABRA4P48169 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.47■□□□□ 0.55
GABRA4P48169 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.47■□□□□ 0.55
GABRA4P48169 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GABRA4P48169 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.47■□□□□ 0.55
GABRA4P48169 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GABRA4P48169 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.46■□□□□ 0.55
GABRA4P48169 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
GABRA4P48169 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.46■□□□□ 0.55
GABRA4P48169 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.46■□□□□ 0.55
GABRA4P48169 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GABRA4P48169 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GABRA4P48169 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GABRA4P48169 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GABRA4P48169 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.46■□□□□ 0.55
GABRA4P48169 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.46■□□□□ 0.55
GABRA4P48169 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.46■□□□□ 0.55
GABRA4P48169 AP005242.2-201ENST00000580065 1175 ntBASIC18.46■□□□□ 0.55
GABRA4P48169 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.46■□□□□ 0.55
GABRA4P48169 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.46■□□□□ 0.55
GABRA4P48169 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.46■□□□□ 0.55
GABRA4P48169 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
GABRA4P48169 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GABRA4P48169 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms