Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.05■□□□□ 0.8
ERCC2P18074 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 AC110285.5-201ENST00000611501 352 ntBASIC20.05■□□□□ 0.8
ERCC2P18074 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.05■□□□□ 0.8
ERCC2P18074 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC2P18074 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ERCC2P18074 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ERCC2P18074 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ERCC2P18074 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ERCC2P18074 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.04■□□□□ 0.8
ERCC2P18074 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ERCC2P18074 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ERCC2P18074 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 PRORSD1P-201ENST00000295112 541 ntBASIC20.04■□□□□ 0.8
ERCC2P18074 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 ABHD17AP1-201ENST00000358206 933 ntBASIC20.04■□□□□ 0.8
ERCC2P18074 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ERCC2P18074 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC2P18074 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.04■□□□□ 0.8
ERCC2P18074 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ERCC2P18074 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.04■□□□□ 0.8
ERCC2P18074 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ERCC2P18074 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ERCC2P18074 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC2P18074 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC2P18074 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.03■□□□□ 0.8
ERCC2P18074 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
ERCC2P18074 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.03■□□□□ 0.8
ERCC2P18074 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 KRT16P5-201ENST00000455284 522 ntBASIC20.03■□□□□ 0.8
ERCC2P18074 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
ERCC2P18074 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC2P18074 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
ERCC2P18074 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.02■□□□□ 0.8
ERCC2P18074 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC2P18074 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ERCC2P18074 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ERCC2P18074 ZNF815P-204ENST00000434898 1737 ntBASIC20.02■□□□□ 0.8
ERCC2P18074 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC2P18074 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.02■□□□□ 0.8
ERCC2P18074 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.02■□□□□ 0.8
ERCC2P18074 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.02■□□□□ 0.8
ERCC2P18074 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.02■□□□□ 0.8
ERCC2P18074 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ERCC2P18074 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.02■□□□□ 0.8
ERCC2P18074 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.02■□□□□ 0.8
ERCC2P18074 AL359736.2-201ENST00000621992 437 ntBASIC20.02■□□□□ 0.8
ERCC2P18074 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC2P18074 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC2P18074 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ERCC2P18074 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.02■□□□□ 0.79
ERCC2P18074 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERCC2P18074 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERCC2P18074 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ERCC2P18074 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERCC2P18074 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ERCC2P18074 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.79
ERCC2P18074 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ERCC2P18074 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC2P18074 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.01■□□□□ 0.79
ERCC2P18074 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.01■□□□□ 0.79
ERCC2P18074 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC2P18074 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.01■□□□□ 0.79
ERCC2P18074 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC2P18074 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.01■□□□□ 0.79
ERCC2P18074 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ERCC2P18074 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ERCC2P18074 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC2P18074 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC2P18074 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ERCC2P18074 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC2P18074 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.01■□□□□ 0.79
ERCC2P18074 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC2P18074 C1QL1P1-201ENST00000568105 661 ntBASIC20.01■□□□□ 0.79
ERCC2P18074 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms