Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.71■□□□□ 0.75
COL4A2P08572 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.71■□□□□ 0.75
COL4A2P08572 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A2P08572 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.71■□□□□ 0.75
COL4A2P08572 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A2P08572 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A2P08572 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A2P08572 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A2P08572 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.71■□□□□ 0.75
COL4A2P08572 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.71■□□□□ 0.75
COL4A2P08572 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.71■□□□□ 0.75
COL4A2P08572 CLEC4GP1-201ENST00000596555 870 ntBASIC19.71■□□□□ 0.75
COL4A2P08572 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.71■□□□□ 0.75
COL4A2P08572 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.71■□□□□ 0.75
COL4A2P08572 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COL4A2P08572 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
COL4A2P08572 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL4A2P08572 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL4A2P08572 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.7■□□□□ 0.74
COL4A2P08572 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 AP000523.1-201ENST00000398242 1049 ntBASIC19.7■□□□□ 0.74
COL4A2P08572 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.7■□□□□ 0.74
COL4A2P08572 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.7■□□□□ 0.74
COL4A2P08572 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.7■□□□□ 0.74
COL4A2P08572 PRSS44-201ENST00000515154 1146 ntBASIC19.7■□□□□ 0.74
COL4A2P08572 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.7■□□□□ 0.74
COL4A2P08572 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.7■□□□□ 0.74
COL4A2P08572 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.7■□□□□ 0.74
COL4A2P08572 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
COL4A2P08572 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.7■□□□□ 0.74
COL4A2P08572 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A2P08572 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL4A2P08572 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL4A2P08572 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL4A2P08572 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL4A2P08572 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL4A2P08572 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL4A2P08572 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL4A2P08572 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL4A2P08572 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.69■□□□□ 0.74
COL4A2P08572 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
COL4A2P08572 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL4A2P08572 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL4A2P08572 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.69■□□□□ 0.74
COL4A2P08572 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.69■□□□□ 0.74
COL4A2P08572 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.69■□□□□ 0.74
COL4A2P08572 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL4A2P08572 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
COL4A2P08572 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.69■□□□□ 0.74
COL4A2P08572 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
COL4A2P08572 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL4A2P08572 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.68■□□□□ 0.74
COL4A2P08572 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 NPAP1P7-201ENST00000613027 823 ntBASIC19.68■□□□□ 0.74
COL4A2P08572 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.68■□□□□ 0.74
COL4A2P08572 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL4A2P08572 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.68■□□□□ 0.74
COL4A2P08572 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.68■□□□□ 0.74
COL4A2P08572 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.68■□□□□ 0.74
COL4A2P08572 TSPY21P-201ENST00000433481 731 ntBASIC19.68■□□□□ 0.74
COL4A2P08572 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL4A2P08572 TSPY23P-201ENST00000440136 739 ntBASIC19.68■□□□□ 0.74
COL4A2P08572 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.68■□□□□ 0.74
COL4A2P08572 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL4A2P08572 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A2P08572 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.67■□□□□ 0.74
COL4A2P08572 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.67■□□□□ 0.74
COL4A2P08572 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A2P08572 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.67■□□□□ 0.74
COL4A2P08572 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.67■□□□□ 0.74
COL4A2P08572 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.67■□□□□ 0.74
COL4A2P08572 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A2P08572 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A2P08572 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL4A2P08572 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.67■□□□□ 0.74
COL4A2P08572 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.67■□□□□ 0.74
COL4A2P08572 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
COL4A2P08572 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.67■□□□□ 0.74
COL4A2P08572 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.67■□□□□ 0.74
COL4A2P08572 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.67■□□□□ 0.74
COL4A2P08572 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms