Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.19□□□□□ -0.46
APOBP04114 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
APOBP04114 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
APOBP04114 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.18□□□□□ -0.46
APOBP04114 AL160237.2-201ENST00000556165 472 ntBASIC12.18□□□□□ -0.46
APOBP04114 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 BX119927.1-201ENST00000636596 1552 ntBASIC12.18□□□□□ -0.46
APOBP04114 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
APOBP04114 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 CA15P1-201ENST00000481698 905 ntBASIC12.18□□□□□ -0.46
APOBP04114 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.18□□□□□ -0.46
APOBP04114 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
APOBP04114 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
APOBP04114 MRPL3P1-201ENST00000400109 1033 ntBASIC12.18□□□□□ -0.46
APOBP04114 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
APOBP04114 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.18□□□□□ -0.46
APOBP04114 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.18□□□□□ -0.46
APOBP04114 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOBP04114 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
APOBP04114 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.17□□□□□ -0.46
APOBP04114 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 TOB2P1-201ENST00000469761 992 ntBASIC12.17□□□□□ -0.46
APOBP04114 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.17□□□□□ -0.46
APOBP04114 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.17□□□□□ -0.46
APOBP04114 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC12.17□□□□□ -0.46
APOBP04114 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.17□□□□□ -0.46
APOBP04114 AC016734.2-201ENST00000624325 1377 ntBASIC12.17□□□□□ -0.46
APOBP04114 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.17□□□□□ -0.46
APOBP04114 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.17□□□□□ -0.46
APOBP04114 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.17□□□□□ -0.46
APOBP04114 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
APOBP04114 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
APOBP04114 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.17□□□□□ -0.46
APOBP04114 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
APOBP04114 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.17□□□□□ -0.46
APOBP04114 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.17□□□□□ -0.46
APOBP04114 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.17□□□□□ -0.46
APOBP04114 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.17□□□□□ -0.46
APOBP04114 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC12.17□□□□□ -0.46
APOBP04114 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOBP04114 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.16□□□□□ -0.46
APOBP04114 KRT18P31-201ENST00000506277 1292 ntBASIC12.16□□□□□ -0.46
APOBP04114 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.16□□□□□ -0.46
APOBP04114 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.16□□□□□ -0.46
APOBP04114 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.16□□□□□ -0.46
APOBP04114 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.16□□□□□ -0.46
APOBP04114 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.16□□□□□ -0.46
APOBP04114 MIR662-201ENST00000384847 95 ntBASIC12.16□□□□□ -0.46
APOBP04114 HMGN1P19-201ENST00000436976 333 ntBASIC12.16□□□□□ -0.46
APOBP04114 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.16□□□□□ -0.46
APOBP04114 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.16□□□□□ -0.46
APOBP04114 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.16□□□□□ -0.46
APOBP04114 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.16□□□□□ -0.46
APOBP04114 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.16□□□□□ -0.46
APOBP04114 TSSC2-201ENST00000450217 709 ntBASIC12.16□□□□□ -0.46
APOBP04114 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.16□□□□□ -0.46
APOBP04114 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOBP04114 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
APOBP04114 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms