Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 ECEL1P1-201ENST00000373592 1742 ntBASIC29.32■■■□□ 2.28
RAPGEF3O95398 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF3O95398 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF3O95398 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 MPI-205ENST00000562606 1052 ntTSL 3 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC29.32■■■□□ 2.28
RAPGEF3O95398 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF3O95398 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF3O95398 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RAPGEF3O95398 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RAPGEF3O95398 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC29.31■■■□□ 2.28
RAPGEF3O95398 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
RAPGEF3O95398 KRT18P1-202ENST00000452408 1331 ntBASIC29.31■■■□□ 2.28
RAPGEF3O95398 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
RAPGEF3O95398 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
RAPGEF3O95398 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC29.31■■■□□ 2.28
RAPGEF3O95398 RASA4DP-201ENST00000460726 1199 ntBASIC29.31■■■□□ 2.28
RAPGEF3O95398 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC29.31■■■□□ 2.28
RAPGEF3O95398 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RAPGEF3O95398 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RAPGEF3O95398 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RAPGEF3O95398 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC29.3■■■□□ 2.28
RAPGEF3O95398 AC106795.1-205ENST00000512851 1056 ntBASIC29.3■■■□□ 2.28
RAPGEF3O95398 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC29.3■■■□□ 2.28
RAPGEF3O95398 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC29.3■■■□□ 2.28
RAPGEF3O95398 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC29.3■■■□□ 2.28
RAPGEF3O95398 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC29.3■■■□□ 2.28
RAPGEF3O95398 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
RAPGEF3O95398 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC29.3■■■□□ 2.28
RAPGEF3O95398 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
RAPGEF3O95398 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF3O95398 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF3O95398 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
RAPGEF3O95398 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF3O95398 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
RAPGEF3O95398 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC29.29■■■□□ 2.28
RAPGEF3O95398 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF3O95398 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF3O95398 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC29.29■■■□□ 2.28
RAPGEF3O95398 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF3O95398 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF3O95398 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF3O95398 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
RAPGEF3O95398 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF3O95398 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF3O95398 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
RAPGEF3O95398 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC29.28■■■□□ 2.28
RAPGEF3O95398 FP700111.2-201ENST00000619190 1892 ntBASIC29.27■■■□□ 2.28
RAPGEF3O95398 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC29.27■■■□□ 2.28
RAPGEF3O95398 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF3O95398 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF3O95398 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF3O95398 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF3O95398 GAD2-202ENST00000376248 680 ntTSL 5 BASIC29.27■■■□□ 2.28
RAPGEF3O95398 AP002469.2-201ENST00000531724 424 ntBASIC29.27■■■□□ 2.28
RAPGEF3O95398 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC29.27■■■□□ 2.28
RAPGEF3O95398 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF3O95398 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC29.27■■■□□ 2.28
RAPGEF3O95398 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF3O95398 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF3O95398 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.28
RAPGEF3O95398 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC29.26■■■□□ 2.27
RAPGEF3O95398 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC29.26■■■□□ 2.27
RAPGEF3O95398 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 AC079776.4-201ENST00000511039 504 ntBASIC29.26■■■□□ 2.27
RAPGEF3O95398 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC29.26■■■□□ 2.27
RAPGEF3O95398 ERF-202ENST00000440177 2032 ntTSL 2 BASIC29.26■■■□□ 2.27
RAPGEF3O95398 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
RAPGEF3O95398 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF3O95398 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC29.26■■■□□ 2.27
RAPGEF3O95398 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
RAPGEF3O95398 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RAPGEF3O95398 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC29.25■■■□□ 2.27
RAPGEF3O95398 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RAPGEF3O95398 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC29.25■■■□□ 2.27
RAPGEF3O95398 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC29.25■■■□□ 2.27
RAPGEF3O95398 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC29.25■■■□□ 2.27
RAPGEF3O95398 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
RAPGEF3O95398 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC29.25■■■□□ 2.27
RAPGEF3O95398 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RAPGEF3O95398 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RAPGEF3O95398 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
RAPGEF3O95398 CD37-204ENST00000535669 1674 ntTSL 2 BASIC29.25■■■□□ 2.27
RAPGEF3O95398 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RAPGEF3O95398 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RAPGEF3O95398 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RAPGEF3O95398 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms