Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC4O75487 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.48■□□□□ 0.71
GPC4O75487 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC4O75487 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC4O75487 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
GPC4O75487 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.47■□□□□ 0.71
GPC4O75487 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GPC4O75487 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.47■□□□□ 0.71
GPC4O75487 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.47■□□□□ 0.71
GPC4O75487 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
GPC4O75487 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.47■□□□□ 0.71
GPC4O75487 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC4O75487 AC008403.3-201ENST00000598924 454 ntBASIC19.47■□□□□ 0.71
GPC4O75487 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.47■□□□□ 0.71
GPC4O75487 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC4O75487 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GPC4O75487 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.47■□□□□ 0.71
GPC4O75487 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC4O75487 AL020996.1-203ENST00000536896 2307 ntBASIC19.47■□□□□ 0.71
GPC4O75487 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GPC4O75487 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.47■□□□□ 0.71
GPC4O75487 PHGDH-210ENST00000641115 1638 ntBASIC19.47■□□□□ 0.71
GPC4O75487 BCL2-203ENST00000589955 5011 ntBASIC19.47■□□□□ 0.71
GPC4O75487 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.47■□□□□ 0.71
GPC4O75487 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC4O75487 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.47■□□□□ 0.71
GPC4O75487 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
GPC4O75487 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.46■□□□□ 0.71
GPC4O75487 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.46■□□□□ 0.71
GPC4O75487 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
GPC4O75487 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
GPC4O75487 AC008687.6-201ENST00000596318 630 ntBASIC19.46■□□□□ 0.71
GPC4O75487 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.46■□□□□ 0.71
GPC4O75487 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.46■□□□□ 0.71
GPC4O75487 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
GPC4O75487 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.46■□□□□ 0.71
GPC4O75487 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
GPC4O75487 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC4O75487 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 AC098818.2-201ENST00000564925 2320 ntBASIC19.45■□□□□ 0.7
GPC4O75487 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GPC4O75487 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.45■□□□□ 0.7
GPC4O75487 RPS2P52-201ENST00000469610 820 ntBASIC19.45■□□□□ 0.7
GPC4O75487 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.45■□□□□ 0.7
GPC4O75487 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.45■□□□□ 0.7
GPC4O75487 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GPC4O75487 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC4O75487 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GPC4O75487 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC4O75487 AC009237.14-201ENST00000609975 1594 ntBASIC19.44■□□□□ 0.7
GPC4O75487 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GPC4O75487 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.44■□□□□ 0.7
GPC4O75487 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC4O75487 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.44■□□□□ 0.7
GPC4O75487 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.44■□□□□ 0.7
GPC4O75487 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
GPC4O75487 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.44■□□□□ 0.7
GPC4O75487 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.44■□□□□ 0.7
GPC4O75487 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.44■□□□□ 0.7
GPC4O75487 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
GPC4O75487 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GPC4O75487 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC4O75487 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GPC4O75487 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC4O75487 AC124283.5-201ENST00000624661 1809 ntBASIC19.44■□□□□ 0.7
GPC4O75487 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC4O75487 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC4O75487 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GPC4O75487 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC4O75487 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms