Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN3O60637 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TSPAN3O60637 AC211429.1-201ENST00000415277 523 ntBASIC20.09■□□□□ 0.81
TSPAN3O60637 ECEL1P3-201ENST00000427961 737 ntBASIC20.09■□□□□ 0.81
TSPAN3O60637 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.09■□□□□ 0.81
TSPAN3O60637 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.09■□□□□ 0.81
TSPAN3O60637 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN3O60637 AL445675.2-201ENST00000620291 557 ntBASIC20.09■□□□□ 0.81
TSPAN3O60637 AL031985.4-201ENST00000642138 673 ntBASIC20.09■□□□□ 0.81
TSPAN3O60637 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN3O60637 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN3O60637 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TSPAN3O60637 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN3O60637 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN3O60637 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN3O60637 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TSPAN3O60637 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN3O60637 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.08■□□□□ 0.81
TSPAN3O60637 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TSPAN3O60637 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TSPAN3O60637 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TSPAN3O60637 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.08■□□□□ 0.81
TSPAN3O60637 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TSPAN3O60637 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TSPAN3O60637 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.08■□□□□ 0.81
TSPAN3O60637 RBM17P1-201ENST00000453646 1190 ntBASIC20.08■□□□□ 0.81
TSPAN3O60637 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.08■□□□□ 0.81
TSPAN3O60637 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TSPAN3O60637 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TSPAN3O60637 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN3O60637 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN3O60637 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN3O60637 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN3O60637 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN3O60637 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 AC004980.1-204ENST00000429707 299 ntBASIC20.07■□□□□ 0.8
TSPAN3O60637 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.07■□□□□ 0.8
TSPAN3O60637 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.07■□□□□ 0.8
TSPAN3O60637 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.07■□□□□ 0.8
TSPAN3O60637 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.07■□□□□ 0.8
TSPAN3O60637 AP000525.1-201ENST00000608286 694 ntBASIC20.07■□□□□ 0.8
TSPAN3O60637 AC131212.4-201ENST00000623606 975 ntBASIC20.07■□□□□ 0.8
TSPAN3O60637 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TSPAN3O60637 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 AC073130.3-201ENST00000624389 2278 ntBASIC20.07■□□□□ 0.8
TSPAN3O60637 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TSPAN3O60637 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.07■□□□□ 0.8
TSPAN3O60637 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.07■□□□□ 0.8
TSPAN3O60637 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TSPAN3O60637 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN3O60637 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TSPAN3O60637 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.06■□□□□ 0.8
TSPAN3O60637 AC079598.2-202ENST00000546624 1451 ntBASIC20.06■□□□□ 0.8
TSPAN3O60637 LINC01465-201ENST00000408887 1940 ntBASIC20.06■□□□□ 0.8
TSPAN3O60637 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TSPAN3O60637 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TSPAN3O60637 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.06■□□□□ 0.8
TSPAN3O60637 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.06■□□□□ 0.8
TSPAN3O60637 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.06■□□□□ 0.8
TSPAN3O60637 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.06■□□□□ 0.8
TSPAN3O60637 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
TSPAN3O60637 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TSPAN3O60637 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TSPAN3O60637 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN3O60637 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TSPAN3O60637 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.05■□□□□ 0.8
TSPAN3O60637 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.05■□□□□ 0.8
TSPAN3O60637 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TSPAN3O60637 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 AC087499.1-201ENST00000418141 1075 ntBASIC20.05■□□□□ 0.8
TSPAN3O60637 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN3O60637 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.05■□□□□ 0.8
TSPAN3O60637 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.05■□□□□ 0.8
TSPAN3O60637 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms