Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
AP3D1O14617 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 AC093484.2-201ENST00000580996 2166 ntBASIC18.18■□□□□ 0.5
AP3D1O14617 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
AP3D1O14617 AC005332.7-201ENST00000614046 2005 ntBASIC18.18■□□□□ 0.5
AP3D1O14617 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.18■□□□□ 0.5
AP3D1O14617 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.18■□□□□ 0.5
AP3D1O14617 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.18■□□□□ 0.5
AP3D1O14617 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.18■□□□□ 0.5
AP3D1O14617 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.18■□□□□ 0.5
AP3D1O14617 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.18■□□□□ 0.5
AP3D1O14617 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
AP3D1O14617 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
AP3D1O14617 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3D1O14617 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
AP3D1O14617 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP3D1O14617 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3D1O14617 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3D1O14617 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3D1O14617 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP3D1O14617 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3D1O14617 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.17■□□□□ 0.5
AP3D1O14617 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3D1O14617 AC091874.3-201ENST00000512672 1195 ntBASIC18.17■□□□□ 0.5
AP3D1O14617 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
AP3D1O14617 AL109923.1-201ENST00000618799 583 ntBASIC18.17■□□□□ 0.5
AP3D1O14617 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.17■□□□□ 0.5
AP3D1O14617 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
AP3D1O14617 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3D1O14617 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3D1O14617 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3D1O14617 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3D1O14617 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3D1O14617 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
AP3D1O14617 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.16■□□□□ 0.5
AP3D1O14617 NEFHP1-201ENST00000412845 2629 ntBASIC18.16■□□□□ 0.5
AP3D1O14617 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.16■□□□□ 0.5
AP3D1O14617 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.16■□□□□ 0.5
AP3D1O14617 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.16■□□□□ 0.5
AP3D1O14617 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
AP3D1O14617 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
AP3D1O14617 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3D1O14617 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3D1O14617 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.15■□□□□ 0.5
AP3D1O14617 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 TNXA-203ENST00000507684 2038 ntBASIC18.15■□□□□ 0.5
AP3D1O14617 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3D1O14617 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3D1O14617 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AP3D1O14617 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP3D1O14617 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3D1O14617 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 MIR4758-201ENST00000577688 71 ntBASIC18.15■□□□□ 0.5
AP3D1O14617 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3D1O14617 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3D1O14617 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
AP3D1O14617 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP3D1O14617 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3D1O14617 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3D1O14617 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms