Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 C1QL1P1-201ENST00000568105 661 ntBASIC17.25■□□□□ 0.35
NPIPB4C9JG80 AC004264.1-201ENST00000608354 794 ntBASIC17.25■□□□□ 0.35
NPIPB4C9JG80 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPB4C9JG80 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 TEX21P-204ENST00000641479 1693 ntBASIC17.23■□□□□ 0.35
NPIPB4C9JG80 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPB4C9JG80 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.22■□□□□ 0.35
NPIPB4C9JG80 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms