Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAI2Q9Y5P3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 ZNF90P1-201ENST00000480493 1951 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 RN7SKP113-201ENST00000363891 295 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC017078.1-201ENST00000416146 368 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 MTND6P5-201ENST00000448266 512 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC069277.2-201ENST00000454211 432 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 RN7SL443P-201ENST00000464331 290 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC097484.1-201ENST00000471148 389 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 RPS17P11-201ENST00000474297 293 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC116562.1-201ENST00000485355 781 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC100784.1-201ENST00000522790 310 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AP003066.2-201ENST00000529375 555 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC092490.3-201ENST00000545370 572 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 MTCO2P2-201ENST00000591258 225 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC011492.1-201ENST00000600023 315 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC069431.2-201ENST00000604149 1099 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC104687.2-201ENST00000604442 342 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC021851.1-201ENST00000608537 1082 ntBASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAI2Q9Y5P3 AC002525.1-201ENST00000624392 1622 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC068538.1-201ENST00000376856 336 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 SNORA2.3-201ENST00000383920 135 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 MIR23B-201ENST00000384832 97 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 PCNPP4-201ENST00000414817 517 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC241520.1-201ENST00000422654 1099 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 VN1R42P-201ENST00000424651 344 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC006994.1-201ENST00000438212 839 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 HMGB1P26-201ENST00000452520 628 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 RN7SL354P-201ENST00000469282 294 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 SYT14P1-201ENST00000481459 721 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 SUMO1P1-201ENST00000497904 306 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 OR5H3P-201ENST00000502817 919 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC008427.1-201ENST00000503102 655 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC004980.4-201ENST00000513375 203 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 NPM1P21-201ENST00000513394 762 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC021483.2-201ENST00000567415 758 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AP000919.1-202ENST00000581139 1264 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC068790.4-201ENST00000602474 263 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 OR7A19P-201ENST00000608051 733 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AC108359.1-201ENST00000616451 1211 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AL512427.1-201ENST00000618593 349 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 AL356863.1-201ENST00000623378 1080 ntBASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAI2Q9Y5P3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms