Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RPS26P3-201ENST00000470205 348 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RN7SL817P-201ENST00000480777 288 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC090543.2-201ENST00000483963 348 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC004057.1-201ENST00000485827 348 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC005912.1-201ENST00000495392 255 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RPS4XP18-201ENST00000495480 763 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 SNORA48.9-201ENST00000516419 162 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 VTA1P2-201ENST00000520205 911 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 HIGD1AP18-201ENST00000520730 278 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC112191.2-201ENST00000522428 333 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC012414.2-201ENST00000559474 187 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 SS18L2P2-201ENST00000583960 235 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 MIR7109-201ENST00000613748 65 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC011815.3-201ENST00000624194 473 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AL136164.3-201ENST00000624429 3978 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AL451142.2-201ENST00000429076 2090 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC090971.4-201ENST00000560291 1800 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 OR56B2P-201ENST00000317102 954 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 RNU1-20P-201ENST00000363314 162 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 RNU6-666P-201ENST00000363499 107 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 RNA5SP513-201ENST00000364648 118 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 RN7SKP124-201ENST00000364730 341 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 MIR921-201ENST00000401133 56 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 VN1R37P-201ENST00000419096 748 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC004448.2-201ENST00000422360 586 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC108075.1-201ENST00000424692 529 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 SUMO2P3-201ENST00000438311 288 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC092013.1-201ENST00000438795 332 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC064862.4-201ENST00000442180 334 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 TDGF1P1-201ENST00000445734 527 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 OR52E7P-201ENST00000452394 933 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC005229.2-201ENST00000456995 399 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC015864.1-201ENST00000496512 544 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC146944.2-203ENST00000502493 354 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC025445.1-201ENST00000502728 300 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC139495.1-202ENST00000513164 354 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC018797.3-201ENST00000513388 1241 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 RN7SKP183-201ENST00000517169 324 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 RNU6-709P-201ENST00000517257 104 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC026688.1-201ENST00000520639 1168 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 IGKV2-4-201ENST00000523070 340 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC008083.2-201ENST00000546707 476 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 HMGB2P1-201ENST00000591146 634 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AL133247.2-201ENST00000603236 482 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC026979.4-201ENST00000606555 645 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC116447.1-201ENST00000613153 453 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC104820.1-201ENST00000624183 307 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC073593.1-201ENST00000624500 411 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AL139254.3-201ENST00000641097 674 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AL672167.1-203ENST00000641299 2975 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC068254.2-201ENST00000623938 3577 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AC015813.6-201ENST00000624409 5808 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 AL359715.4-201ENST00000606629 1436 ntBASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KCNIP3Q9Y2W7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.01□□□□□ -1.77
KCNIP3Q9Y2W7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms