Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 MIR16-2-201ENST00000362117 81 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RN7SKP269-201ENST00000365545 319 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RNA5SP105-201ENST00000391123 113 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AL121776.1-201ENST00000429337 372 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AL450263.2-201ENST00000439400 589 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 PPIAP20-201ENST00000449839 135 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC023141.9-201ENST00000458734 412 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 LARP7P4-201ENST00000481075 878 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RN7SL466P-201ENST00000497546 295 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 PPM1AP1-201ENST00000502740 1135 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RNA5SP249-201ENST00000516127 99 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RPL23AP53-201ENST00000521854 457 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC107918.3-201ENST00000533272 382 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AP002373.2-201ENST00000541631 1060 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC124283.4-201ENST00000581815 456 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 SUGT1P3-202ENST00000604259 383 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC112220.2-201ENST00000605513 533 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AL049767.1-202ENST00000637826 242 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 ZNF90P1-201ENST00000480493 1951 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 NXF4-202ENST00000416098 1465 ntBASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRPS28Q9Y2Q9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC013442.1-201ENST00000397347 228 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 HMGB3P19-201ENST00000403971 560 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AL390774.1-201ENST00000411924 246 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AL513325.1-201ENST00000417716 1034 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 RPL36AP10-201ENST00000421785 322 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 EI24P4-201ENST00000423683 1078 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC092447.3-201ENST00000426027 686 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 RPS4XP16-201ENST00000427198 791 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 HMGB3P5-201ENST00000428894 612 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 PTP4A1P3-201ENST00000433661 420 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 MTCYBP21-201ENST00000443300 1113 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AL009048.1-201ENST00000450437 298 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC098826.2-201ENST00000452011 651 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 Z92846.1-201ENST00000456203 268 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AL139824.2-201ENST00000458731 1095 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 RN7SL809P-201ENST00000482040 297 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC021146.7-201ENST00000509604 775 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC133963.2-201ENST00000513686 578 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 snoU109.6-201ENST00000516831 118 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC118942.1-201ENST00000529674 1035 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 AC090022.1-201ENST00000546569 311 ntBASIC4.35□□□□□ -1.71
MRPS28Q9Y2Q9 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms