Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 NDUFA5P5-201ENST00000468361 342 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC116562.1-201ENST00000485355 781 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AK4P6-201ENST00000505168 528 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 PPBPP1-201ENST00000510807 373 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 NPM1P6-201ENST00000521088 871 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC008147.3-201ENST00000548666 354 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC015912.2-201ENST00000571053 181 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC008638.3-201ENST00000603341 463 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC095055.1-201ENST00000603472 1113 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC008966.2-201ENST00000606157 453 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RNU6-368P-201ENST00000620928 107 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RNU6-538P-201ENST00000622329 107 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
NDE1Q9NXR1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.59□□□□□ -1.68
NDE1Q9NXR1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.59□□□□□ -1.68
NDE1Q9NXR1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 CR382285.2-201ENST00000624662 1495 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 SNORA17.1-201ENST00000362945 126 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 RNU6-1176P-201ENST00000390955 107 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 Z97832.1-201ENST00000402490 328 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 ARL4AP5-201ENST00000404372 599 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 RNA5SP104-201ENST00000410989 118 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AL590609.2-201ENST00000421430 368 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 MTCO1P51-201ENST00000427672 1060 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC073508.1-201ENST00000428866 656 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC064862.4-201ENST00000442180 334 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC094085.1-201ENST00000468914 584 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 OR51K1P-201ENST00000510214 950 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC069240.1-201ENST00000548774 375 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 CD24P2-201ENST00000565486 219 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC122134.1-201ENST00000565664 1104 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC007448.1-201ENST00000582714 234 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC005776.1-201ENST00000603164 290 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC105254.2-201ENST00000603636 436 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AL671309.1-201ENST00000603750 544 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC010424.2-201ENST00000607594 443 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 AC024933.1-201ENST00000608472 348 ntBASIC4.58□□□□□ -1.68
NDE1Q9NXR1 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NDE1Q9NXR1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 ZFRP1-201ENST00000457579 2970 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 OR10J6P-201ENST00000289731 930 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AL357515.1-201ENST00000402967 542 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC073464.3-201ENST00000422564 712 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 RPL7P57-201ENST00000423238 740 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC023141.6-201ENST00000429418 337 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 RPS17P8-201ENST00000434525 335 ntBASIC4.57□□□□□ -1.68
NDE1Q9NXR1 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms