Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 MTCYBP19-201ENST00000517463 1124 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 HMGN2P47-201ENST00000559378 272 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC234778.2-201ENST00000566241 354 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 ELOCP28-201ENST00000590044 317 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC104785.1-201ENST00000603220 588 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 U6atac.1-201ENST00000616025 117 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC017007.4-201ENST00000503353 1352 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC007342.7-201ENST00000624610 2337 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC131971.1-201ENST00000332881 1482 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 RNU6-867P-201ENST00000364956 107 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 P2RY10P2-201ENST00000416730 913 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 OR5W1P-201ENST00000423705 938 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 CENPIP1-201ENST00000425713 902 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC005033.1-201ENST00000428904 813 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 PSMD10P3-201ENST00000437000 448 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC090638.1-201ENST00000498296 909 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC091965.2-201ENST00000512324 613 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC022447.1-201ENST00000515358 464 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 SNORA31.13-201ENST00000516624 135 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 RN7SKP66-201ENST00000516681 231 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 OR5G4P-201ENST00000525251 760 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AL133241.1-201ENST00000556832 487 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 MIR4436B2-201ENST00000581415 91 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 MIR4436B1-201ENST00000583272 91 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC087763.1-201ENST00000603391 286 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC133644.2-201ENST00000608142 540 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AL139418.1-201ENST00000613613 177 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC009878.1-201ENST00000621819 340 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 MIR6810-201ENST00000622701 70 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC068137.3-201ENST00000639191 341 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC073869.6-201ENST00000640656 341 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC003973.3-201ENST00000624863 2822 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 AC018628.1-201ENST00000624147 3819 ntBASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.38□□□□□ -1.39
PDLIM7Q9NR12 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDLIM7Q9NR12 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
PDLIM7Q9NR12 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PDLIM7Q9NR12 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.37□□□□□ -1.39
PDLIM7Q9NR12 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDLIM7Q9NR12 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PDLIM7Q9NR12 AC007938.2-201ENST00000604666 2634 ntBASIC6.37□□□□□ -1.39
PDLIM7Q9NR12 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDLIM7Q9NR12 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 270 ms