Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ATP5G1P3-201ENST00000463301 410 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 DEFB109F-201ENST00000491870 277 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AK4P6-201ENST00000505168 528 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 RN7SKP276-201ENST00000516242 268 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 MIR3667-201ENST00000581025 74 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AL391358.1-201ENST00000605342 190 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 NAMPTP1-201ENST00000440465 2514 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AC010928.1-201ENST00000592477 1447 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 RBPJP2-201ENST00000618187 1444 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AP001002.1-201ENST00000625148 1513 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 A2MP1-204ENST00000566278 4130 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 RNU1-85P-201ENST00000364127 164 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 RN7SKP100-201ENST00000411258 284 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AC092447.2-201ENST00000435487 669 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AC005154.2-201ENST00000438110 379 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 H2AFZP5-201ENST00000446960 382 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AL935212.3-201ENST00000450729 284 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AC135999.1-201ENST00000478962 479 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AC093720.1-201ENST00000505681 714 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 SOX5P1-201ENST00000524155 1127 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 MIR6853-201ENST00000619642 74 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 NEAT1-202ENST00000501122 22743 ntBASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
UPF3BQ9BZI7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 ZFRP1-201ENST00000457579 2970 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 SCN1A-220ENST00000641603 12506 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AL590240.1-201ENST00000334118 313 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 Y_RNA.126-201ENST00000363382 111 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 GTF2IP2-201ENST00000424290 697 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 RSL24D1P6-201ENST00000426934 401 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 PPIAP13-201ENST00000434706 478 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AC098799.3-201ENST00000506095 438 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AL512782.1-201ENST00000603093 364 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AC068831.8-201ENST00000620171 435 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AC140113.4-201ENST00000622087 222 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AC004232.3-201ENST00000622977 525 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 MAPK10-349ENST00000641767 3661 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 MAPK10-303ENST00000641324 3959 ntBASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF3BQ9BZI7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
UPF3BQ9BZI7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
UPF3BQ9BZI7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 RNA5SP388-201ENST00000362584 119 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 MIR1193-201ENST00000408109 78 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 AC007064.3-201ENST00000422608 359 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 RPL21P91-201ENST00000429231 479 ntBASIC5.46□□□□□ -1.54
UPF3BQ9BZI7 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms