Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 PCNAP1-202ENST00000595299 752 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC135178.6-201ENST00000605314 398 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC010857.1-201ENST00000606398 594 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC239803.2-201ENST00000610161 430 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 MIR6719-201ENST00000622428 87 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 AC090229.1-201ENST00000590983 1609 ntBASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHMP4AQ9BY43 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 MIR142-201ENST00000384835 87 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 DPPA2P3-201ENST00000411853 655 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC093162.1-201ENST00000419682 124 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 VN1R54P-201ENST00000435210 1049 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC004980.3-201ENST00000447046 365 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC004923.2-201ENST00000529649 369 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 CKS1BP1-201ENST00000555221 240 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AL121594.4-201ENST00000556211 1196 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 MIR4646-201ENST00000580775 63 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC007448.1-201ENST00000582714 234 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 HMGB2P1-201ENST00000591146 634 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC040174.2-201ENST00000602701 465 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC004948.1-201ENST00000609858 672 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 EIF3FP1-201ENST00000613970 806 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC245389.2-201ENST00000616023 576 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC243756.2-201ENST00000618406 463 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 AC242843.1-201ENST00000618702 573 ntBASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.63□□□□□ -1.35
CHMP4AQ9BY43 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 AC100871.1-201ENST00000507871 1456 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 SNURFL-201ENST00000309296 343 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 XKRYP4-201ENST00000414395 483 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 AC114814.2-201ENST00000419195 485 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 RPS27P18-201ENST00000431701 247 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 MED28P3-201ENST00000444288 531 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 XKRYP5-201ENST00000449659 483 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 NPM1P17-201ENST00000479221 602 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 AC008562.1-201ENST00000521763 330 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 NMNAT1P1-201ENST00000554095 876 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 AL355802.4-201ENST00000607635 548 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 MIR6715B-201ENST00000637172 77 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 EIF2AP4-201ENST00000424793 1781 ntBASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4AQ9BY43 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.61□□□□□ -1.35
CHMP4AQ9BY43 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.61□□□□□ -1.35
CHMP4AQ9BY43 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.61□□□□□ -1.35
CHMP4AQ9BY43 AL133412.1-201ENST00000380194 2992 ntBASIC6.61□□□□□ -1.35
CHMP4AQ9BY43 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms