Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL137792.2-201ENST00000443484 235 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 RPL26P30-201ENST00000453533 435 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 PSPC1P2-201ENST00000455130 225 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 RNU6-329P-201ENST00000459618 107 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 SIAH1P1-201ENST00000479411 923 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 RPS3AP50-201ENST00000487064 803 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 RPL17P2-201ENST00000491913 451 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AC025674.1-201ENST00000507074 324 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 RNU2-46P-201ENST00000517038 113 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AP003467.2-201ENST00000520175 319 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AP000790.1-201ENST00000528891 737 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL162632.2-201ENST00000553933 399 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL591767.3-201ENST00000554632 525 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL137100.2-201ENST00000555786 315 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AC015801.1-201ENST00000585651 153 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 SNX29P2-204ENST00000603801 875 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 CYP2C61P-201ENST00000604072 290 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AP001330.4-201ENST00000604350 154 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AC090510.2-201ENST00000617465 629 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 TMSB4XP2-201ENST00000335179 210 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 Y_RNA.176-201ENST00000363815 109 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 Y_RNA.381-201ENST00000365666 102 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RNU6-533P-201ENST00000384144 107 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RNU6-1263P-201ENST00000384601 106 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 U3.23-201ENST00000391132 200 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RN7SKP271-201ENST00000410528 320 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 Y_RNA.608-201ENST00000410647 95 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC016397.1-201ENST00000412463 242 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RPS12P24-201ENST00000412619 387 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 CYP4F29P-201ENST00000420685 446 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 LSM3P3-201ENST00000436601 306 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 OR51P1P-201ENST00000447547 942 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AL133351.3-201ENST00000454998 193 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC002075.1-201ENST00000457396 676 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC099521.1-201ENST00000482557 334 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RN7SL797P-201ENST00000486314 297 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC068781.1-201ENST00000488231 618 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC112184.1-201ENST00000505179 312 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RNU4-49P-201ENST00000516080 140 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RNY4P37-201ENST00000516225 96 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 RNA5SP92-201ENST00000516437 110 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC104986.1-201ENST00000517978 436 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 TPM3P3-201ENST00000521343 354 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AL109766.1-201ENST00000555080 552 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 MIR4437-201ENST00000581331 60 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC068790.5-201ENST00000602741 355 ntBASIC6.85□□□□□ -1.31
COL25A1Q9BXS0 AC007255.2-201ENST00000604053 631 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms