Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VRK1Q99986 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.31□□□□□ -1.56
VRK1Q99986 CASC19-204ENST00000641001 2055 ntBASIC5.31□□□□□ -1.56
VRK1Q99986 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VRK1Q99986 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.31□□□□□ -1.56
VRK1Q99986 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK1Q99986 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VRK1Q99986 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK1Q99986 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VRK1Q99986 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.31□□□□□ -1.56
VRK1Q99986 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VRK1Q99986 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.31□□□□□ -1.56
VRK1Q99986 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VRK1Q99986 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK1Q99986 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 AL133243.2-201ENST00000610331 1621 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 HSPA8P14-201ENST00000552265 1805 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK1Q99986 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK1Q99986 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 AC011447.7-201ENST00000624228 1590 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
VRK1Q99986 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VRK1Q99986 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VRK1Q99986 Y_RNA.77-201ENST00000362962 107 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 RNU6-1066P-201ENST00000363573 105 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 RNU4-24P-201ENST00000364565 139 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 RN7SKP275-201ENST00000364626 301 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 RN7SKP81-201ENST00000365603 331 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 Y_RNA.436-201ENST00000384097 102 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AL132875.1-201ENST00000403623 949 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 RNU2-65P-201ENST00000410162 185 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 P2RY10P2-201ENST00000416730 913 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK1Q99986 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 RPS7P14-201ENST00000426405 583 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AL035407.1-201ENST00000429211 571 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AL389925.1-201ENST00000432257 728 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 AL591503.2-201ENST00000442314 1005 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AC097463.1-201ENST00000447288 481 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC144530.1-201ENST00000452862 555 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 PPIAP27-201ENST00000453800 265 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 RPL37P3-201ENST00000456825 293 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 MTND1P16-201ENST00000465177 898 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 RN7SL284P-201ENST00000498823 275 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC090958.1-201ENST00000511122 351 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.3□□□□□ -1.56
VRK1Q99986 MTATP6P1-201ENST00000514057 681 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 PRMT5P1-201ENST00000514351 598 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.3□□□□□ -1.56
VRK1Q99986 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC136777.2-201ENST00000522979 358 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.3□□□□□ -1.56
VRK1Q99986 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 MTCYBP28-201ENST00000566728 1132 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC025857.2-201ENST00000602711 238 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AC006363.1-201ENST00000603806 463 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AL390816.3-201ENST00000604527 1066 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AC004948.1-201ENST00000609858 672 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AC243654.2-201ENST00000612843 443 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AL096712.1-201ENST00000614561 159 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AL512652.1-201ENST00000619006 500 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AC098679.4-201ENST00000624241 654 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK1Q99986 BCORP1-203ENST00000513194 5093 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 AL022311.1-201ENST00000623726 19416 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK1Q99986 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VRK1Q99986 AC010329.2-201ENST00000595195 2737 ntBASIC5.3□□□□□ -1.56
VRK1Q99986 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK1Q99986 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms