Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AC011487.3-201ENST00000593607 453 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 XIST-210ENST00000602863 775 ntTSL 3 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AC020910.2-201ENST00000603635 610 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AC009027.1-201ENST00000604510 479 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AC011626.1-201ENST00000604710 562 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AL135999.3-201ENST00000610501 812 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AC211486.4-201ENST00000621495 113 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AL390318.1-201ENST00000624564 687 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 AC119674.1-212ENST00000641155 993 ntBASIC3.21□□□□□ -1.9
SIGMAR1Q99720 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.21□□□□□ -1.9
SIGMAR1Q99720 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 PRO1804-201ENST00000623780 2050 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AF127577.6-201ENST00000623352 2191 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RNU1-65P-201ENST00000363919 148 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RNA5SP433-201ENST00000364491 114 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RNU6-673P-201ENST00000365084 104 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 MTCO3P31-201ENST00000405526 789 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL390316.1-201ENST00000406279 553 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 MTND4P11-201ENST00000417020 1058 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC009238.2-201ENST00000431026 355 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 HMGB3P24-201ENST00000433260 622 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 ACTR3P2-201ENST00000439585 1257 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 UBQLN1P1-207ENST00000441056 1169 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC009263.1-201ENST00000441193 1239 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL163193.1-201ENST00000444895 788 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RPL7P48-201ENST00000461513 746 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RN7SL269P-201ENST00000467795 305 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RN7SL330P-201ENST00000469709 307 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC097173.1-201ENST00000505862 819 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL158068.1-201ENST00000506116 616 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 LDHAP1-201ENST00000509421 992 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 HMGN1P17-201ENST00000513734 295 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RN7SKP238-201ENST00000516483 249 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RNU6-1231P-201ENST00000517185 103 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AP004607.5-201ENST00000532034 217 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 PDCL2P2-201ENST00000533651 189 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC005000.1-201ENST00000536192 288 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC106785.3-201ENST00000564064 847 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 ZNF192P1-203ENST00000565888 810 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL078601.3-201ENST00000573303 535 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 MIR3186-201ENST00000577404 85 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RN7SL230P-201ENST00000580835 303 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 GMFG-212ENST00000602185 423 ntTSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 LLPHP1-201ENST00000603571 367 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 RNA5SP108-201ENST00000605921 117 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL512413.1-201ENST00000606489 382 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 U91328.4-201ENST00000608919 517 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AL080312.2-201ENST00000613001 630 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC012676.3-201ENST00000614983 479 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC245014.3-201ENST00000618589 347 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 MIR4278-201ENST00000636094 69 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 PDZK1P1-202ENST00000425209 1350 ntBASIC3.2□□□□□ -1.9
SIGMAR1Q99720 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.2□□□□□ -1.9
SIGMAR1Q99720 AC109780.1-201ENST00000451768 1344 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms