Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHOX2BQ99453 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHOX2BQ99453 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHOX2BQ99453 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PHOX2BQ99453 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 RNU6-729P-201ENST00000384399 107 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AL355862.1-201ENST00000412705 353 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC074085.1-201ENST00000413598 418 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AL354890.1-201ENST00000413730 346 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 RPS20P5-201ENST00000434808 360 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 AL731892.1-201ENST00000437364 1192 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 TRAPPC2P3-201ENST00000443200 321 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AL137792.2-201ENST00000443484 235 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC007383.1-201ENST00000445875 636 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC091685.2-201ENST00000454924 864 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 RPS4XP10-201ENST00000465034 731 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC025164.1-201ENST00000496249 478 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 MRPS35P2-201ENST00000508242 191 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 RNU6-864P-201ENST00000516256 108 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 RNU6-1220P-201ENST00000517126 108 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 IGKV3D-34-201ENST00000522638 302 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 AP003084.1-201ENST00000524828 742 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 MIR3154-201ENST00000577829 84 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 MIR212-201ENST00000586026 110 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 AP000654.2-201ENST00000605633 586 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AL390877.1-201ENST00000605704 214 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AL031777.2-201ENST00000611953 196 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 MIR8075-201ENST00000614354 80 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC099494.2-201ENST00000623371 978 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC244517.12-201ENST00000623581 663 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC010653.3-201ENST00000635332 232 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AC135068.12-201ENST00000637370 931 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.56□□□□□ -1.2
PHOX2BQ99453 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHOX2BQ99453 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.56□□□□□ -1.2
PHOX2BQ99453 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHOX2BQ99453 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHOX2BQ99453 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC004972.1-201ENST00000623934 2209 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 MAPK10-347ENST00000641762 2856 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC092999.1-201ENST00000624004 1924 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PHOX2BQ99453 Y_RNA.193-201ENST00000363979 102 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 Y_RNA.339-201ENST00000365325 102 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 Y_RNA.373-201ENST00000365600 103 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AL133260.1-201ENST00000405720 405 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 CBX3P6-201ENST00000430257 527 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AL591212.2-201ENST00000433923 257 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 IGKV1OR-3-201ENST00000446944 348 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC234782.3-201ENST00000461229 433 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 UOX-201ENST00000471089 899 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC093267.1-201ENST00000489176 961 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AL445187.1-201ENST00000502685 260 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 PTP4A1P4-201ENST00000512479 322 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 RNA5SP92-201ENST00000516437 110 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 RPL7P20-201ENST00000520308 745 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AP003497.1-201ENST00000528472 562 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AP000907.2-201ENST00000530827 353 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC245052.7-201ENST00000601161 359 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC140658.6-201ENST00000603958 201 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC245389.1-201ENST00000605141 529 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 RNVU1-19-201ENST00000613023 167 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.55□□□□□ -1.2
PHOX2BQ99453 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.55□□□□□ -1.2
PHOX2BQ99453 AC024580.1-201ENST00000623020 674 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms