Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AURKAPS1-201ENST00000451805 1212 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 CDC42P1-201ENST00000456658 548 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 ATP5LP5-201ENST00000483050 299 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 RN7SL570P-201ENST00000484405 292 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 RN7SL591P-201ENST00000496150 292 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 HPRT1P2-201ENST00000505250 544 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC091860.1-201ENST00000505723 432 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 PRELID3BP4-201ENST00000515476 571 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 Y_RNA.655-201ENST00000515919 96 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 SNORD46.2-201ENST00000516021 102 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 RNA5SP438-201ENST00000516561 112 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 WBP1LP3-201ENST00000523033 208 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 MTCO3P15-201ENST00000526563 574 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC008015.1-201ENST00000555505 465 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 SS18L2P2-201ENST00000583960 235 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC068790.2-201ENST00000602601 557 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 DPRXP5-201ENST00000604662 539 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AL135786.2-201ENST00000608422 615 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AL392048.1-201ENST00000613946 534 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AL603755.1-201ENST00000619504 163 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC007342.8-201ENST00000623278 678 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC007490.1-201ENST00000624321 703 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 ZNF663P-202ENST00000641770 1131 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 PDZK1P1-202ENST00000425209 1350 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX18Q96RF0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AL731566.1-201ENST00000620490 1937 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX18Q96RF0 AC053481.2-202ENST00000582394 1500 ntBASIC5.13□□□□□ -1.59
SNX18Q96RF0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX18Q96RF0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX18Q96RF0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX18Q96RF0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX18Q96RF0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX18Q96RF0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX18Q96RF0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX18Q96RF0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX18Q96RF0 ENSAP3-201ENST00000312710 333 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 FAM133CP-201ENST00000332869 704 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 RNU1-87P-201ENST00000363727 170 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 MIR130A-201ENST00000385274 89 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 ERHP2-201ENST00000402323 299 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 MTND4P22-201ENST00000413116 1169 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 TCEA1P4-201ENST00000415066 844 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 OR4K6P-201ENST00000416478 897 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 Z75741.2-201ENST00000417272 1167 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 OR6K4P-201ENST00000423179 955 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 RPF2P1-201ENST00000424137 906 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 YWHAEP5-201ENST00000431545 765 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC073143.1-201ENST00000436316 395 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC007998.1-201ENST00000474156 672 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 RPS17P15-201ENST00000475609 349 ntBASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.12□□□□□ -1.59
SNX18Q96RF0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms