Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
NECTIN4Q96NY8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AC120338.1-201ENST00000625074 1541 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 RNA5SP388-201ENST00000362584 119 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 SNORD65-201ENST00000391079 73 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 SNORA57.1-201ENST00000391227 145 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL136131.1-201ENST00000406079 803 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL512504.1-201ENST00000415494 778 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL121878.1-201ENST00000418638 859 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 FABP7P1-201ENST00000424004 391 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL732292.1-201ENST00000426692 226 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL590623.1-201ENST00000427864 105 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 BUD31P2-201ENST00000449374 300 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL133244.1-201ENST00000456007 258 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 RWDD4P1-201ENST00000488019 565 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 SLC25A15P5-201ENST00000508033 253 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 FTH1P11-201ENST00000517577 551 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL109766.1-201ENST00000555080 552 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AC010424.2-201ENST00000607594 443 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AC019131.2-201ENST00000609071 870 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 RMST_5.1-201ENST00000618704 126 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 AL133370.2-201ENST00000619934 439 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 SAMMSON-213ENST00000641336 1521 ntBASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.07□□□□□ -1.6
NECTIN4Q96NY8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC110792.3-201ENST00000595906 1614 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 RNU6-1251P-201ENST00000364502 107 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 MIR7-1-201ENST00000384871 110 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 RN7SKP263-201ENST00000411194 309 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 GPS2P1-201ENST00000411761 986 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 ATG4AP1-201ENST00000416893 538 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 CCRL1P1-201ENST00000449542 1053 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC010618.1-201ENST00000469924 477 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC109327.1-201ENST00000471666 403 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 NIP7P2-201ENST00000485801 544 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC015795.1-201ENST00000513669 327 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 RNU2-30P-201ENST00000516209 141 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 RNU1-6P-201ENST00000516290 144 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC133555.2-201ENST00000550213 292 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC084759.1-201ENST00000561168 290 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC021483.2-201ENST00000567415 758 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC023575.1-201ENST00000580510 358 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC069061.3-201ENST00000582254 823 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC006363.1-201ENST00000603806 463 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC026367.3-201ENST00000619032 590 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AC011944.2-201ENST00000624440 683 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 AL356094.1-201ENST00000624663 1212 ntBASIC5.06□□□□□ -1.6
NECTIN4Q96NY8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms