Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC005412.2-201ENST00000492004 341 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 PGBD4P4-201ENST00000509673 613 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC006427.1-201ENST00000514359 712 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 RNU6-941P-201ENST00000516346 108 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 RNU6-347P-201ENST00000516658 105 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 OSBPL9P3-201ENST00000534523 595 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL049830.4-201ENST00000555149 351 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 CYCSP40-201ENST00000575927 294 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC008814.1-201ENST00000603797 406 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC092953.2-201ENST00000608000 699 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL163051.2-201ENST00000618976 735 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 MIR8080-201ENST00000622224 89 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC011815.3-201ENST00000624194 473 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 AL691477.1-201ENST00000624398 162 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AC092435.4-201ENST00000623012 4159 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 ASNSP1-201ENST00000518311 1939 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
RFT1Q96AA3 AP000756.2-201ENST00000624168 2567 ntBASIC4.46□□□□□ -1.7
RFT1Q96AA3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFT1Q96AA3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC092747.4-201ENST00000620519 1861 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AL672167.1-205ENST00000641112 3080 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC096656.1-201ENST00000623826 1364 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 METTL21EP-201ENST00000298105 713 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 SNORA62.2-201ENST00000364672 152 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 PTGES3P2-201ENST00000407942 482 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 SDHDP6-201ENST00000414693 480 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 MTCO3P4-201ENST00000419236 787 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 AP000281.1-201ENST00000444036 316 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AL161636.2-201ENST00000445179 927 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 RPL31P15-201ENST00000449770 338 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 CCDC75P1-201ENST00000469247 791 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 RN7SL547P-201ENST00000490793 290 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 RPS27AP16-201ENST00000492222 470 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 RNA5SP373-201ENST00000517271 95 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 OR4R2P-201ENST00000530815 597 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC022404.1-201ENST00000555320 273 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 SUGT1P3-202ENST00000604259 383 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC007423.1-201ENST00000605009 627 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC104695.2-201ENST00000605056 775 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC010245.2-201ENST00000606908 1167 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 AC118658.2-201ENST00000618697 459 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 GTF2H2B-203ENST00000508065 1432 ntBASIC4.45□□□□□ -1.7
RFT1Q96AA3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
RFT1Q96AA3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RFT1Q96AA3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFT1Q96AA3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms