Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.21□□□□□ -1.42
ERCC4Q92889 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ERCC4Q92889 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ERCC4Q92889 AL450345.1-202ENST00000605741 3881 ntBASIC6.21□□□□□ -1.42
ERCC4Q92889 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
ERCC4Q92889 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.21□□□□□ -1.42
ERCC4Q92889 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ERCC4Q92889 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ERCC4Q92889 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.21□□□□□ -1.42
ERCC4Q92889 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ERCC4Q92889 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 BX005019.1-201ENST00000561881 1810 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AL022393.1-201ENST00000625142 1677 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
ERCC4Q92889 RN7SKP149-201ENST00000363008 344 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 RPL23AP59-201ENST00000399415 461 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 DNAJC19P6-201ENST00000401853 280 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.2□□□□□ -1.42
ERCC4Q92889 SNORA11.3-201ENST00000408471 128 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC245060.4-201ENST00000413293 1121 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 MTCO2P7-201ENST00000446518 666 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.2□□□□□ -1.42
ERCC4Q92889 IGBP1P3-201ENST00000447449 1000 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 ZNF736P5Y-201ENST00000451173 805 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC233982.1-201ENST00000451247 436 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 RN7SL188P-201ENST00000469842 285 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC022215.1-201ENST00000481770 362 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.2□□□□□ -1.42
ERCC4Q92889 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.2□□□□□ -1.42
ERCC4Q92889 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AC008565.1-201ENST00000509046 885 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.2□□□□□ -1.42
ERCC4Q92889 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 HMGB1P42-201ENST00000532126 553 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC084824.1-201ENST00000550917 1005 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC008015.1-201ENST00000555505 465 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AL049870.4-201ENST00000555741 486 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC090888.1-201ENST00000561335 1141 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AC135628.1-201ENST00000568867 534 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC092121.1-201ENST00000569452 202 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AP005262.1-201ENST00000582646 997 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AP002884.5-201ENST00000595053 1132 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AC080013.3-201ENST00000606839 578 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AC012557.1-201ENST00000607115 611 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AP003392.5-201ENST00000607857 415 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 SNORA11.6-201ENST00000619030 128 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ERCC4Q92889 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 MUC2-202ENST00000613187 4845 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ERCC4Q92889 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ERCC4Q92889 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ERCC4Q92889 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
ERCC4Q92889 AC104446.1-201ENST00000613728 1321 ntBASIC6.2□□□□□ -1.42
ERCC4Q92889 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
ERCC4Q92889 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ERCC4Q92889 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ERCC4Q92889 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ERCC4Q92889 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.2□□□□□ -1.42
ERCC4Q92889 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC005261.4-201ENST00000600047 1385 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 MT-RNR2-201ENST00000387347 1559 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 U3.7-201ENST00000363668 216 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
ERCC4Q92889 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.19□□□□□ -1.42
ERCC4Q92889 SNORA16A-201ENST00000384342 137 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 Y_RNA.505-201ENST00000384489 102 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 HMGB1P20-201ENST00000402555 677 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AL590084.1-201ENST00000407885 387 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 SETP15-201ENST00000412724 337 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 Z75741.2-201ENST00000417272 1167 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AK4P4-201ENST00000419465 646 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AL365203.2-201ENST00000423444 196 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 RIMKLBP2-201ENST00000424737 654 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms