Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AC016180.1-201ENST00000567945 403 ntBASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AC068020.1-201ENST00000594215 661 ntBASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AC130352.1-201ENST00000602979 661 ntBASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AC019131.2-201ENST00000609071 870 ntBASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 SDR42E1P1-201ENST00000611327 477 ntBASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AL049794.2-201ENST00000616301 365 ntBASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 AC009269.6-201ENST00000621778 588 ntBASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SLC44A1Q8WWI5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SLC44A1Q8WWI5 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.96□□□□□ -1.61
SLC44A1Q8WWI5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
SLC44A1Q8WWI5 Z95327.2-201ENST00000414579 1873 ntBASIC4.96□□□□□ -1.61
SLC44A1Q8WWI5 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
SLC44A1Q8WWI5 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SLC44A1Q8WWI5 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 ECM1P2-201ENST00000503354 1577 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 SNORA66-201ENST00000384792 133 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC233289.1-201ENST00000403700 508 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 U3.35-201ENST00000408405 208 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC069282.1-201ENST00000411911 526 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 TATDN1P1-201ENST00000414123 891 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 RPA2P2-201ENST00000419698 796 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 RPL7L1P9-201ENST00000431298 745 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AL163193.1-201ENST00000444895 788 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC009127.1-201ENST00000467090 155 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 RPS4XP1-201ENST00000482189 787 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC093801.2-201ENST00000503966 1050 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC008638.1-201ENST00000506035 866 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 RNA5SP464-201ENST00000516251 108 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 RNA5SP34-201ENST00000516887 130 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AL358913.1-201ENST00000554342 121 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC023158.1-201ENST00000561632 1025 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC005034.4-201ENST00000603612 899 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 IMMP1LP3-201ENST00000604197 224 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC073137.1-201ENST00000605636 634 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC097505.1-201ENST00000610199 565 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC004241.3-201ENST00000611728 517 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC008759.3-201ENST00000613300 508 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC006840.1-201ENST00000623069 542 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC107068.1-201ENST00000563286 4218 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 AC000123.3-201ENST00000624029 4975 ntBASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A1Q8WWI5 HSPA8P18-201ENST00000439846 1928 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 AC011493.1-201ENST00000596753 1632 ntBASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A1Q8WWI5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms