Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC104685.1-201ENST00000502445 371 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 RNA5SP271-201ENST00000516700 88 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 DUXAP2-201ENST00000519198 589 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 TPM3P3-201ENST00000521343 354 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 TRIM51DP-201ENST00000529746 596 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC007494.1-201ENST00000562293 760 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC092121.1-201ENST00000569452 202 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AP001596.2-201ENST00000608410 312 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AL021918.2-201ENST00000613415 194 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC011472.4-201ENST00000615848 491 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC135068.5-201ENST00000624197 983 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AL162377.2-201ENST00000624532 337 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AL603839.4-201ENST00000624658 1005 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 SNX18P12-201ENST00000624821 759 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC129915.3-201ENST00000634128 948 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 MTCO1P6-201ENST00000481192 1384 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC100871.1-201ENST00000507871 1456 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AF287957.1-201ENST00000607368 1595 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC095050.2-201ENST00000510748 1458 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 RNA5SP273-201ENST00000362484 113 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 ZNF603P-201ENST00000405613 487 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 RNGTTP1-201ENST00000420965 728 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 CYCSP46-201ENST00000423569 204 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AL389925.1-201ENST00000432257 728 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 TCEA1P3-201ENST00000443005 880 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC239798.3-201ENST00000454459 408 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC021205.1-201ENST00000468797 348 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC124945.1-201ENST00000485133 188 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 PPP1R11P1-201ENST00000486095 376 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC114781.3-201ENST00000512083 142 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 RNA5SP438-201ENST00000516561 112 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 CDC42P3-201ENST00000518493 633 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC016957.1-201ENST00000534895 309 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 MIR4776-2-201ENST00000580204 80 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 OR4K7P-201ENST00000580232 945 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 MIR548Y-201ENST00000582739 110 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC008507.1-201ENST00000587506 734 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms