Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 Z92545.1-201ENST00000411782 234 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 RPS4XP15-201ENST00000489210 795 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 RPL23AP94-201ENST00000512518 302 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 MIR3651-201ENST00000630427 90 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 CASC19-261ENST00000641853 1638 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 EIF4HP2-201ENST00000424380 563 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC091286.1-201ENST00000431233 461 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 AL159987.2-201ENST00000432754 307 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 RPS20P4-201ENST00000461659 355 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 HMGN1P15-201ENST00000513870 295 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 AC027455.1-201ENST00000574104 594 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 AL137843.1-201ENST00000605078 385 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13CQ709C8 LINC01808-202ENST00000641680 1116 ntBASIC3.52□□□□□ -1.85
VPS13CQ709C8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.52□□□□□ -1.85
VPS13CQ709C8 USP9YP4-201ENST00000424401 1745 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AL133243.3-201ENST00000617415 3004 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 DDX18P5-201ENST00000534547 1306 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC012671.1-201ENST00000451912 203 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 UBDP1-202ENST00000457888 382 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AL356121.2-201ENST00000624715 780 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC106871.1-201ENST00000568324 3102 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC024560.2-201ENST00000507981 1497 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 SNORA5A-201ENST00000384111 134 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 MIR5685-201ENST00000579080 79 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC079587.1-201ENST00000603846 277 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 RNA5SP72-201ENST00000364442 117 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 AL358472.1-201ENST00000431295 329 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AL935212.3-201ENST00000450729 284 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC093166.2-201ENST00000455969 1017 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 AC025175.1-201ENST00000606482 759 ntBASIC3.51□□□□□ -1.85
VPS13CQ709C8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13CQ709C8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VPS13CQ709C8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 RN7SKP74-201ENST00000362849 309 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 RN7SKP156-201ENST00000410308 342 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 RN7SKP167-201ENST00000411047 285 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms