Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 MIR6826-201ENST00000617808 98 ntBASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NHLRC1Q6VVB1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC126323.6-202ENST00000568092 3511 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AL078599.1-201ENST00000402075 293 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC092570.3-201ENST00000420113 693 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 MTND2P11-201ENST00000423638 648 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 OR2AH1P-201ENST00000425717 928 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 MTND2P8-201ENST00000450555 1025 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC026348.1-201ENST00000462549 1053 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 RN7SL222P-201ENST00000476452 299 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC027308.1-201ENST00000517993 110 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC007225.2-201ENST00000562529 256 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC110743.1-201ENST00000584870 478 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AL023583.1-201ENST00000607518 1143 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC126915.2-201ENST00000610957 190 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AC015871.5-202ENST00000623252 701 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 MAPK10-349ENST00000641767 3661 ntBASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.56□□□□□ -1.68
NHLRC1Q6VVB1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 AL133268.1-201ENST00000405676 1401 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 MTCO1P18-201ENST00000455518 1419 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 RNF6P1-201ENST00000444889 1784 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 Y_RNA.110-201ENST00000363220 99 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 SNORA2.3-201ENST00000383920 135 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 RPL31P52-201ENST00000407532 367 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 MIR1271-201ENST00000408537 86 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 RN7SKP97-201ENST00000410966 333 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 PNRC2P1-201ENST00000423940 420 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 AL390879.2-203ENST00000426943 1121 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 COX6CP13-201ENST00000428703 226 ntBASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.55□□□□□ -1.68
NHLRC1Q6VVB1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms