Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RPS7P1-201ENST00000571702 585 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC008638.3-201ENST00000603341 463 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC112191.3-201ENST00000604371 277 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC005332.6-201ENST00000613178 446 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC104010.1-201ENST00000616889 150 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC078909.2-201ENST00000620584 398 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC015799.1-201ENST00000622996 3122 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC007114.2-201ENST00000576014 4281 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 AC005332.9-201ENST00000620266 2921 ntBASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXR1Q6PIV2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AL731556.1-201ENST00000394628 3711 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC013268.3-201ENST00000262716 2324 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 SNORD42.2-201ENST00000365570 69 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 SNORA70H-201ENST00000383910 135 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 SNORA70J-201ENST00000384182 135 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 MIR551B-201ENST00000384984 96 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AL603766.1-201ENST00000407763 664 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 RNU2-39P-201ENST00000410604 198 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 RNU2-62P-201ENST00000410868 191 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 OR9R1P-201ENST00000412200 877 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 CHCHD3P1-201ENST00000425516 676 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 Z68868.1-201ENST00000429048 544 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AL121916.1-201ENST00000429405 308 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 SS18L2P1-201ENST00000445923 213 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 NDUFA5P7-201ENST00000452914 242 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC005165.2-201ENST00000466070 380 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 ACTR3P3-201ENST00000480448 893 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC008496.1-201ENST00000509131 295 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 Y_RNA.711-201ENST00000516993 102 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AP003084.1-201ENST00000524828 742 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 OR6M3P-201ENST00000531567 700 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC023827.2-201ENST00000566880 1061 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC010653.1-201ENST00000571108 881 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 PRR13P5-201ENST00000596581 442 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AL162413.1-201ENST00000603198 110 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 MTCO2P22-201ENST00000603246 681 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC019257.2-201ENST00000605539 497 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AL365434.2-201ENST00000607979 234 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC015908.5-201ENST00000623289 343 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 MIR665-201ENST00000635949 72 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC007603.3-201ENST00000636915 979 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 AL356585.10-201ENST00000641883 123 ntBASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXR1Q6PIV2 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms