Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ZNF549Q6P9A3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZNF549Q6P9A3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 SNORA51.1-201ENST00000363243 140 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 RN7SKP113-201ENST00000363891 295 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 RNU6-207P-201ENST00000384137 107 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 LRRC37BP1-201ENST00000398851 714 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 BX119904.4-201ENST00000424402 301 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 VN1R42P-201ENST00000424651 344 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 DNAJA1P1-201ENST00000425106 1187 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 UBE2V1P1-201ENST00000430836 445 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 RPL35AP21-201ENST00000437667 333 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 CR769776.1-201ENST00000441254 787 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL358794.1-201ENST00000445689 381 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC004980.3-201ENST00000447046 365 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 MRPL35P2-201ENST00000448009 511 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 RSL24D1P3-201ENST00000449255 495 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 FAR2P1-206ENST00000449736 709 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL606490.1-201ENST00000452266 765 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL691482.1-201ENST00000453255 87 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL389915.2-201ENST00000454576 441 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL356981.1-201ENST00000454879 684 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 HMGB1P4-201ENST00000455362 567 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 RPS17P2-201ENST00000461663 408 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 NAP1L1P3-201ENST00000462291 880 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 RN7SL222P-201ENST00000476452 299 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC010374.1-201ENST00000503762 1237 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC091435.1-201ENST00000505442 584 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC012339.2-201ENST00000523996 453 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC125611.1-201ENST00000549563 229 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 LSM3P2-201ENST00000551246 273 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC116553.2-201ENST00000564203 463 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC011840.5-201ENST00000582125 771 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC099785.1-201ENST00000605697 437 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC093673.2-201ENST00000609674 331 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC009090.3-201ENST00000616553 565 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AL035461.2-201ENST00000619201 524 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC099494.2-201ENST00000623371 978 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 AC006927.2-201ENST00000639256 389 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5□□□□□ -1.61
ZNF549Q6P9A3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 OR9K1P-202ENST00000641111 3217 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 ACTR3BP5-201ENST00000448440 1479 ntBASIC5□□□□□ -1.61
ZNF549Q6P9A3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5□□□□□ -1.61
ZNF549Q6P9A3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 MTCO1P11-201ENST00000429111 1528 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC083843.2-201ENST00000568248 6253 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 RNU5B-4P-201ENST00000363508 111 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 Y_RNA.318-201ENST00000365131 97 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC234772.1-201ENST00000377927 937 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 ATP5HP3-201ENST00000396994 486 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 Z68694.1-201ENST00000413929 841 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC013429.2-201ENST00000418798 781 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms