Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC016542.1-201ENST00000608259 493 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC096586.2-201ENST00000610260 441 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC083809.1-201ENST00000615051 472 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC139713.2-214ENST00000642059 1811 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC005261.2-201ENST00000593427 4258 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDS5AQ29RF7 AC120338.1-201ENST00000625074 1541 ntBASIC5.58□□□□□ -1.52
PDS5AQ29RF7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 RNA5SP447-201ENST00000363749 119 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 SNORA62-201ENST00000365493 153 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AC068538.1-201ENST00000376856 336 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 MIR7-1-201ENST00000384871 110 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AL592293.2-201ENST00000422292 996 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 SEC63P1-201ENST00000425785 1258 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 NMNAT1P2-201ENST00000435192 860 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 ATG10-AS1-201ENST00000504846 648 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AC015795.1-201ENST00000513669 327 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 RNA5SP249-201ENST00000516127 99 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 OR8G5-201ENST00000524943 1041 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 MIR4472-2-201ENST00000582069 67 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 AC006272.2-201ENST00000594725 163 ntBASIC5.57□□□□□ -1.52
PDS5AQ29RF7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDS5AQ29RF7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC013268.2-201ENST00000420753 337 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 FAR1P1-201ENST00000427163 934 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 RPS15AP29-201ENST00000445539 400 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 MORF4L1P4-201ENST00000450245 976 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 CYCSP53-201ENST00000455540 265 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 RPL31P53-201ENST00000457065 348 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC013356.1-201ENST00000489027 564 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AK4P6-201ENST00000505168 528 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC112184.1-201ENST00000505179 312 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC087477.6-201ENST00000559595 843 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC136624.4-201ENST00000573044 370 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AP005019.3-201ENST00000620418 560 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC112198.2-201ENST00000426589 6996 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC133552.1-201ENST00000569988 4007 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC108751.5-201ENST00000492880 1336 ntBASIC5.56□□□□□ -1.52
PDS5AQ29RF7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.56□□□□□ -1.52
PDS5AQ29RF7 AC108467.2-201ENST00000617640 1597 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AC104260.2-201ENST00000623551 3497 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AC020633.1-201ENST00000468439 2247 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 U3.22-201ENST00000391120 215 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AL589655.1-201ENST00000405398 482 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AL356387.2-201ENST00000422272 243 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 C4BPAP2-201ENST00000428434 478 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 TPT1P12-201ENST00000448968 492 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms