Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AP000916.1-201ENST00000533869 835 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.6□□□□□ -1.67
SCN1BQ07699 OR5AN2P-201ENST00000534535 896 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.6□□□□□ -1.67
SCN1BQ07699 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.6□□□□□ -1.67
SCN1BQ07699 NTAN1P1-201ENST00000603150 646 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC098483.2-201ENST00000603158 454 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AL353600.1-201ENST00000608148 251 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN1BQ07699 FRG1HP-204ENST00000617940 757 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC073569.3-201ENST00000619055 682 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC024595.1-201ENST00000623088 387 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC000123.2-201ENST00000623124 461 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC138907.10-201ENST00000623708 983 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AL590396.2-201ENST00000636511 1041 ntBASIC4.6□□□□□ -1.67
SCN1BQ07699 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.6□□□□□ -1.67
SCN1BQ07699 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN1BQ07699 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SCN1BQ07699 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN1BQ07699 AC022031.1-201ENST00000585985 2593 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.59□□□□□ -1.67
SCN1BQ07699 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 AC092435.4-201ENST00000623012 4159 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 AC000123.3-201ENST00000624029 4975 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
SCN1BQ07699 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
SCN1BQ07699 DBIP1-201ENST00000401435 260 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.59□□□□□ -1.67
SCN1BQ07699 OR6E1P-201ENST00000414424 923 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.59□□□□□ -1.67
SCN1BQ07699 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.59□□□□□ -1.67
SCN1BQ07699 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN1BQ07699 FABP7P2-201ENST00000429946 379 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.59□□□□□ -1.67
SCN1BQ07699 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 FMO7P-201ENST00000436045 768 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 HMGB3P9-201ENST00000441799 583 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN1BQ07699 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SCN1BQ07699 AC073587.1-201ENST00000447093 876 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 RPL7P31-201ENST00000450192 724 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN1BQ07699 AC092905.1-201ENST00000467527 949 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AC094085.1-201ENST00000468914 584 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AC092754.1-201ENST00000472975 479 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN1BQ07699 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.59□□□□□ -1.67
SCN1BQ07699 PFN1P8-201ENST00000497012 543 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 MTCO2P9-201ENST00000503214 694 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.59□□□□□ -1.67
SCN1BQ07699 MTND6P2-201ENST00000512226 524 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AF186190.1-201ENST00000517470 480 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN1BQ07699 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.59□□□□□ -1.67
SCN1BQ07699 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.59□□□□□ -1.67
SCN1BQ07699 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN1BQ07699 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN1BQ07699 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.59□□□□□ -1.67
SCN1BQ07699 AGGF1P9-201ENST00000561884 913 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AC093510.2-201ENST00000562820 896 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AC027104.1-201ENST00000563702 681 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 HNRNPCP4-201ENST00000571636 900 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 PPATP2-201ENST00000605635 508 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SCN1BQ07699 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
SCN1BQ07699 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 AL359742.1-201ENST00000622497 540 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 BMS1P21-201ENST00000634565 365 ntBASIC4.59□□□□□ -1.67
SCN1BQ07699 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SCN1BQ07699 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
SCN1BQ07699 SALL4P2-201ENST00000423288 2910 ntBASIC4.59□□□□□ -1.68
SCN1BQ07699 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SCN1BQ07699 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SCN1BQ07699 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SCN1BQ07699 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SCN1BQ07699 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN1BQ07699 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SCN1BQ07699 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms