Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SOX4Q06945 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 AC091305.2-201ENST00000624049 1576 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.58□□□□□ -1.36
SOX4Q06945 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SOX4Q06945 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SOX4Q06945 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 RNA5SP375-201ENST00000362975 119 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 RNY4P14-201ENST00000363656 96 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SOX4Q06945 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 RNU6-692P-201ENST00000384496 107 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 MIR525-201ENST00000384978 85 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX4Q06945 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.58□□□□□ -1.36
SOX4Q06945 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 DSTNP5-201ENST00000427921 523 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 SEPT7P5-201ENST00000434048 306 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 HMGB1P45-201ENST00000435986 653 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX4Q06945 AC239367.2-201ENST00000447309 705 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AC016724.1-201ENST00000453215 421 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.58□□□□□ -1.36
SOX4Q06945 GAPDHP39-201ENST00000481866 979 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX4Q06945 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 RNA5SP438-201ENST00000516561 112 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 RNU6-358P-201ENST00000516564 75 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.58□□□□□ -1.36
SOX4Q06945 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX4Q06945 OR5AK1P-201ENST00000524837 922 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AP005639.1-201ENST00000526939 192 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.58□□□□□ -1.36
SOX4Q06945 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SOX4Q06945 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.58□□□□□ -1.36
SOX4Q06945 RPA2P1-201ENST00000556557 721 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX4Q06945 AC063977.5-201ENST00000601044 974 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 AP001836.1-201ENST00000604675 523 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 TCL6_3.1-201ENST00000619064 137 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX4Q06945 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SOX4Q06945 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SOX4Q06945 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 AC096921.2-201ENST00000561507 1916 ntBASIC6.58□□□□□ -1.36
SOX4Q06945 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX4Q06945 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.58□□□□□ -1.36
SOX4Q06945 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 AC006026.1-201ENST00000444025 1803 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SOX4Q06945 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX4Q06945 RNA5SP122-201ENST00000384457 108 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 HMGN1P20-201ENST00000411849 300 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 EEF1A1P40-201ENST00000412883 573 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 RPA2P2-201ENST00000419698 796 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX4Q06945 AC092647.1-201ENST00000420654 287 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX4Q06945 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX4Q06945 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX4Q06945 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX4Q06945 OR7E125P-201ENST00000443450 846 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AC244505.5-201ENST00000443639 207 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.57□□□□□ -1.36
SOX4Q06945 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 CFL1P4-201ENST00000451536 498 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 RANP1-206ENST00000455094 651 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AC103563.5-201ENST00000455643 364 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 SNORD42A-201ENST00000459584 64 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms